CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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rps-13
(
Caenorhabditis elegans
)
Paired box
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00292 (PAX)
IPR001523
WBGene00004482
T312109_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
C16A3.9
Paired box
25
72
WQKMTAEEVQDQIVKMAKKGLRPSQIGVILRDSHGVGQVRRLAGNKIF
Links
Other
Paired box
family TFs
Other
Caenorhabditis elegans
TFs
18 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
CBN07460
Caenorhabditis brenneri
CBN07460
N
1.000
CRE03166
Caenorhabditis remanei
CRE03166
N
1.000
CJA02893
Caenorhabditis japonica
CJA02893
N
0.978
CBG19687
Caenorhabditis briggsae
CBG19687
N
0.957
ANCCAN_06410
Ancylostoma caninum
ANCCAN_06410
N
0.837
ANCCEY_10735
Ancylostoma ceylanicum
ANCCEY_10735
N
0.837
ANCDUO_14679
Ancylostoma duodenale
ANCDUO_14679
N
0.837
HCOI00506400
Haemonchus contortus
HCOI00506400
N
0.837
HCOI00608900
Haemonchus contortus
HCOI00608900
N
0.837
HPLM_0001001001
Haemonchus placei
HPLM_0001001001
N
0.837
NECAME_16739
Necator americanus
NECAME_16739
N
0.837
OESDEN_19099
Oesophagostomum dentatum
OESDEN_19099
N
0.837
TELCIR_08212
Teladorsagia circumcincta
TELCIR_08212
N
0.837
TELCIR_25960
Teladorsagia circumcincta
TELCIR_25960
N
0.804
DICVIV_11664
Dictyocaulus viviparus
DICVIV_11664
N
0.783
MhA1_Contig239.frz3.gene35
Meloidogyne hapla
MhA1_Contig239.frz3.gene35
N
0.778
HPBE_0000407401
Heligmosomoides bakeri
HPBE_0000407401
N
0.739
NBR_0001294901
Nippostrongylus brasiliensis
NBR_0001294901
N
0.739