CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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NBR_0001294901
(
Nippostrongylus brasiliensis
)
Paired box
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00292 (PAX)
IPR001523
NBR_0001294901
T312805_2.00
WormBase:ParaSite (2015-Oct-22)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
NBR_0001294901-mRNA-1
Paired box
27
69
KLTSADVQDQIVKLAKKGLRPSQIGVILRDSHGVAQVRRVTGN
Links
Other
Paired box
family TFs
Other
Nippostrongylus brasiliensis
TFs
39 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
TELCIR_25960
Teladorsagia circumcincta
TELCIR_25960
N
1.000
DICVIV_11664
Dictyocaulus viviparus
DICVIV_11664
N
0.976
HPBE_0000407401
Heligmosomoides bakeri
HPBE_0000407401
N
0.976
ANCCAN_06410
Ancylostoma caninum
ANCCAN_06410
N
0.953
ANCCEY_10735
Ancylostoma ceylanicum
ANCCEY_10735
N
0.953
ANCDUO_14679
Ancylostoma duodenale
ANCDUO_14679
N
0.953
HCOI00506400
Haemonchus contortus
HCOI00506400
N
0.953
HCOI00608900
Haemonchus contortus
HCOI00608900
N
0.953
HPLM_0001001001
Haemonchus placei
HPLM_0001001001
N
0.953
NECAME_16739
Necator americanus
NECAME_16739
N
0.953
OESDEN_19099
Oesophagostomum dentatum
OESDEN_19099
N
0.953
TELCIR_08212
Teladorsagia circumcincta
TELCIR_08212
N
0.953
CJA02893
Caenorhabditis japonica
CJA02893
N
0.854
CBG19687
Caenorhabditis briggsae
CBG19687
N
0.829
Minc00512
Meloidogyne incognita
Minc00512
N
0.805
genemark-nMf.1.1.scaf00604-processed-gene-0.10
Meloidogyne floridensis
genemark-nMf.1.1.scaf00604-processed-gene-0.10
N
0.805
MhA1_Contig239.frz3.gene35
Meloidogyne hapla
MhA1_Contig239.frz3.gene35
N
0.800
ACOC_0000845101
Angiostrongylus costaricensis
ACOC_0000845101
N
0.780
ACAC_0001009501
Angiostrongylus cantonensis
ACAC_0001009501
N
0.756
GPLIN_000355200
Globodera pallida
GPLIN_000355200
N
0.756
L596_g26620
Steinernema carpocapsae
L596_g26620
N
0.756
L889_g15825
Steinernema feltiae
L889_g15825
N
0.756
L892_g25366
Steinernema scapterisci
L892_g25366
N
0.756
CBN07460
Caenorhabditis brenneri
CBN07460
N
0.739
CRE03166
Caenorhabditis remanei
CRE03166
N
0.739
rps-13
Caenorhabditis elegans
WBGene00004482
N
0.739
Minc02205
Meloidogyne incognita
Minc02205
N
0.732
ALUE_0001231901
Ascaris lumbricoides
ALUE_0001231901
N
0.732
ASIM_0000112501
Anisakis simplex
ASIM_0000112501
N
0.732
ASIM_0000209101
Anisakis simplex
ASIM_0000209101
N
0.732
ASU_00847
Ascaris suum
ASU_00847
N
0.732
GPUH_0002186101
Gongylonema pulchrum
GPUH_0002186101
N
0.732
L898_g11242
Steinernema monticolum
L898_g11242
N
0.732
TCNE_0001348801
Toxocara canis
TCNE_0001348801
N
0.732
Bm13719
Brugia malayi
Bm13719
N
0.707
rps13
Ciona intestinalis
ENSCING00000018058
N
0.707
L798_05322
Zootermopsis nevadensis
L798_05322
N
0.707
EVEC_0000342601
Enterobius vermicularis
EVEC_0000342601
N
0.707
nAv.1.0.1.g04098
Acanthocheilonema viteae
nAv.1.0.1.g04098
N
0.707