CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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genemark-nMf.1.1.scaf00604-processed-gene-0.10
(
Meloidogyne floridensis
)
Paired box
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00292 (PAX)
IPR001523
genemark-nMf.1.1.scaf00604-processed-gene-0.10
T312629_2.00
WormBase:ParaSite (2015-Oct-22)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
genemark-nMf.1.1.scaf00604-processed-gene-0.10-mRNA-1
Paired box
46
104
QKLTSQDVEEQIVKLARKGLRPSQIGVILRDSHGVAQVRRITGNKIVRILRSKGMAPEI
Links
Other
Paired box
family TFs
Other
Meloidogyne floridensis
TFs
13 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Minc00512
Meloidogyne incognita
Minc00512
N
1.000
MhA1_Contig239.frz3.gene35
Meloidogyne hapla
MhA1_Contig239.frz3.gene35
N
0.867
NBR_0001294901
Nippostrongylus brasiliensis
NBR_0001294901
N
0.805
ANCCAN_06410
Ancylostoma caninum
ANCCAN_06410
N
0.767
ANCCEY_10735
Ancylostoma ceylanicum
ANCCEY_10735
N
0.767
ANCDUO_14679
Ancylostoma duodenale
ANCDUO_14679
N
0.767
HCOI00506400
Haemonchus contortus
HCOI00506400
N
0.767
HCOI00608900
Haemonchus contortus
HCOI00608900
N
0.767
HPLM_0001001001
Haemonchus placei
HPLM_0001001001
N
0.767
NECAME_16739
Necator americanus
NECAME_16739
N
0.767
OESDEN_19099
Oesophagostomum dentatum
OESDEN_19099
N
0.767
TELCIR_08212
Teladorsagia circumcincta
TELCIR_08212
N
0.767
DICVIV_11664
Dictyocaulus viviparus
DICVIV_11664
N
0.756