CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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MhA1_Contig239.frz3.gene35
(
Meloidogyne hapla
)
Paired box
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00292 (PAX)
IPR001523
MhA1_Contig239.frz3.gene35
T312789_2.00
WormBase:ParaSite (2015-Oct-22)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
MhA1_Contig239.frz3.gene35
Paired box
25
71
WQKLTSQDVEEQIVKLARKGLRPSQIGVILRDSHGVAQVRRITGNKI
Links
Other
Paired box
family TFs
Other
Meloidogyne hapla
TFs
22 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
ANCCAN_06410
Ancylostoma caninum
ANCCAN_06410
N
0.884
ANCCEY_10735
Ancylostoma ceylanicum
ANCCEY_10735
N
0.884
ANCDUO_14679
Ancylostoma duodenale
ANCDUO_14679
N
0.884
HCOI00506400
Haemonchus contortus
HCOI00506400
N
0.884
HCOI00608900
Haemonchus contortus
HCOI00608900
N
0.884
HPLM_0001001001
Haemonchus placei
HPLM_0001001001
N
0.884
NECAME_16739
Necator americanus
NECAME_16739
N
0.884
OESDEN_19099
Oesophagostomum dentatum
OESDEN_19099
N
0.884
TELCIR_08212
Teladorsagia circumcincta
TELCIR_08212
N
0.884
Minc00512
Meloidogyne incognita
Minc00512
N
0.867
DICVIV_11664
Dictyocaulus viviparus
DICVIV_11664
N
0.867
genemark-nMf.1.1.scaf00604-processed-gene-0.10
Meloidogyne floridensis
genemark-nMf.1.1.scaf00604-processed-gene-0.10
N
0.867
HPBE_0000407401
Heligmosomoides bakeri
HPBE_0000407401
N
0.844
TELCIR_25960
Teladorsagia circumcincta
TELCIR_25960
N
0.844
GPLIN_000355200
Globodera pallida
GPLIN_000355200
N
0.822
CJA02893
Caenorhabditis japonica
CJA02893
N
0.800
Minc02205
Meloidogyne incognita
Minc02205
N
0.800
NBR_0001294901
Nippostrongylus brasiliensis
NBR_0001294901
N
0.800
CBG19687
Caenorhabditis briggsae
CBG19687
N
0.778
CBN07460
Caenorhabditis brenneri
CBN07460
N
0.778
CRE03166
Caenorhabditis remanei
CRE03166
N
0.778
rps-13
Caenorhabditis elegans
WBGene00004482
N
0.778