CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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rps13
(
Ciona intestinalis
)
Paired box
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00292 (PAX)
IPR001523
ENSCING00000018058
T311591_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
ENSCINP00000033191
Paired box
27
98
KLSSEDVKEQIYKLAKKGLRPSQIGVILRDSHGVAQVRFVTGNQILRVLKAKGLAPDLPEDIYHLIKKAVAM
Links
Other
Paired box
family TFs
Other
Ciona intestinalis
TFs
11 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
ENSCSAVG00000004583
Ciona savignyi
ENSCSAVG00000004583
N
0.931
ACAC_0001009501
Angiostrongylus cantonensis
ACAC_0001009501
N
0.736
ACOC_0000845101
Angiostrongylus costaricensis
ACOC_0000845101
N
0.722
EVEC_0000342601
Enterobius vermicularis
EVEC_0000342601
N
0.722
GPUH_0002186101
Gongylonema pulchrum
GPUH_0002186101
N
0.722
L889_g15825
Steinernema feltiae
L889_g15825
N
0.722
WBGene00244804
Onchocerca volvulus
WBGene00244804
N
0.708
ASIM_0000112501
Anisakis simplex
ASIM_0000112501
N
0.708
ASIM_0000209101
Anisakis simplex
ASIM_0000209101
N
0.708
nOo.2.0.1.g08019
Onchocerca ochengi
nOo.2.0.1.g08019
N
0.708
NBR_0001294901
Nippostrongylus brasiliensis
NBR_0001294901
N
0.707