ENSLACG00000001265 (Latimeria chalumnae)
Pipsqueak

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF05225 (HTH_psq) IPR007889 ENSLACG00000001265 T313566_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
ENSACAG00000012432
M02430_2.00 		Anolis carolinensis
NNNCNAAWNN
NNWTTNGNNN		 PBM
Weirauch et al.(2014)
pTH9220 		0.978 0.978
ENSMGAG00000009953
M02433_2.00 		Meleagris gallopavo
NNNYNAAWNN
NNWTTNRNNN		 PBM
Weirauch et al.(2014)
pTH8649 		0.978 0.978
lcorl
M02438_2.00 		Xenopus tropicalis
NYCNAAWHN
NDWTTNGRN		 PBM
Weirauch et al.(2014)
pTH8558 		0.978 0.978
ENSORLG00000000044
M02434_2.00 		Oryzias latipes
CCCAAAWT
AWTTTGGG		 PBM
Weirauch et al.(2014)
pTH9275 		0.889 0.889
ENSGACG00000007469
M02432_2.00 		Gasterosteus aculeatus
NVNMGAWACH
DGTWTCKNBN		 PBM
Weirauch et al.(2014)
pTH9179 		0.822 0.822
ENSORLG00000007805
M02435_2.00 		Oryzias latipes
SCNAAWNNNN
NNNNWTTNGS		 PBM
Weirauch et al.(2014)
pTH9277 		0.822 0.822
For this family, TFs with SR scores > 0.778 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
ENSLACP00000001413 Pipsqueak 483 528

Links

Other Pipsqueak family TFs
Other Latimeria chalumnae TFs

70 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
Aan_R012556 Calypte anna Aan_R012556 I 0.978
Afo_R002709 Aptenodytes forsteri Afo_R002709 I 0.978
Alligator_sinensis_CCG020164.1 Alligator sinensis Alligator_sinensis_CCG020164.1 I 0.978
Brh_R001506 Buceros rhinoceros Brh_R001506 I 0.978
Cmyd_10003742 Chelonia mydas Cmyd_10003742 I 0.978
ENSACAG00000012432 Anolis carolinensis ENSACAG00000012432 D 0.978
ENSAMEG00000000186 Ailuropoda melanoleuca ENSAMEG00000000186 I 0.978
ENSAMXG00000021599 Astyanax mexicanus ENSAMXG00000021599 I 0.889
ENSAPLG00000003032 Anas platyrhynchos ENSAPLG00000003032 I 0.978
ENSBTAG00000004029 Bos taurus ENSBTAG00000004029 I 0.978
ENSBTAP00000005261-D1 Bos grunniens ENSBTAP00000005261-D1 I 0.978
ENSCAFG00000008905 Canis familiaris ENSCAFG00000008905 I 0.978
ENSCHOG00000001981 Choloepus hoffmanni ENSCHOG00000001981 I 0.978
ENSCJAG00000016484 Callithrix jacchus ENSCJAG00000016484 I 0.978
ENSCPOG00000005739 Cavia porcellus ENSCPOG00000005739 I 0.978
ENSCSAG00000006043 Chlorocebus sabaeus ENSCSAG00000006043 I 0.978
lcor Danio rerio ENSDARG00000100908 I 0.911
ENSECAG00000013517 Equus caballus ENSECAG00000013517 I 0.978
ENSETEG00000015066 Echinops telfairi ENSETEG00000015066 I 0.978
ENSFALG00000008484 Ficedula albicollis ENSFALG00000008484 I 0.978
ENSFCAG00000028121 Felis catus ENSFCAG00000028121 I 0.978
LCOR Homo sapiens ENSG00000196233 I 0.978
ENSGACG00000007469 Gasterosteus aculeatus ENSGACG00000007469 D 0.822
ENSGALG00000023649 Gallus gallus ENSGALG00000023649 I 0.978
ENSGGOG00000026110 Gorilla gorilla ENSGGOG00000026110 I 0.978
ENSGMOG00000018278 Gadus morhua ENSGMOG00000018278 I 0.844
ENSLAFG00000014271 Loxodonta africana ENSLAFG00000014271 I 0.978
ENSLOCG00000012823 Lepisosteus oculatus ENSLOCG00000012823 I 0.956
ENSMGAG00000009953 Meleagris gallopavo ENSMGAG00000009953 D 0.978
ENSMICG00000007572 Microcebus murinus ENSMICG00000007572 I 0.978
ENSMLUG00000000494 Myotis lucifugus ENSMLUG00000000494 I 0.978
ENSMMUG00000010425 Macaca mulatta ENSMMUG00000010425 I 0.978
ENSMODG00000004531 Monodelphis domestica ENSMODG00000004531 I 0.978
Lcor Mus musculus ENSMUSG00000025019 I 0.978
ENSNLEG00000013648 Nomascus leucogenys ENSNLEG00000013648 I 0.978
ENSOARG00000008725 Ovis aries ENSOARG00000008725 I 0.978
ENSOGAG00000008137 Otolemur garnettii ENSOGAG00000008137 I 0.978
ENSONIG00000000255 Oreochromis niloticus ENSONIG00000000255 I 0.889
ENSONIG00000018331 Oreochromis niloticus ENSONIG00000018331 I 0.889
ENSOPRG00000014745 Ochotona princeps ENSOPRG00000014745 I 0.978
ENSORLG00000000044 Oryzias latipes ENSORLG00000000044 D 0.889
ENSORLG00000007805 Oryzias latipes ENSORLG00000007805 D 0.822
ENSP00000360138 Macaca fascicularis ENSP00000360138 I 0.978
ENSPCAG00000007084 Procavia capensis ENSPCAG00000007084 I 0.978
ENSPFOG00000009902 Poecilia formosa ENSPFOG00000009902 I 0.889
ENSPFOG00000013017 Poecilia formosa ENSPFOG00000013017 I 0.844
ENSPMAG00000003112 Petromyzon marinus ENSPMAG00000003112 I 0.800
ENSPSIG00000009179 Pelodiscus sinensis ENSPSIG00000009179 I 0.978
LCOR Pan troglodytes ENSPTRG00000002800 I 0.978
ENSPVAG00000003364 Pteropus vampyrus ENSPVAG00000003364 I 0.978
Lcor Rattus norvegicus ENSRNOG00000042679 I 0.978
ENSSARG00000008230 Sorex araneus ENSSARG00000008230 I 0.978
ENSSHAG00000018667 Sarcophilus harrisii ENSSHAG00000018667 I 0.978
ENSSSCG00000010511 Sus scrofa ENSSSCG00000010511 I 0.978
ENSSTOG00000010808 Ictidomys tridecemlineatus ENSSTOG00000010808 I 0.978
ENSTBEG00000005837 Tupaia belangeri ENSTBEG00000005837 I 0.978
ENSTGUG00000009834 Taeniopygia guttata ENSTGUG00000009834 I 0.978
lcor Tetraodon nigroviridis ENSTNIG00000003614 I 0.911
lcor Takifugu rubripes ENSTRUG00000006194 I 0.911
ENSTRUG00000008704 Takifugu rubripes ENSTRUG00000008704 I 0.889
ENSTTRG00000009856 Tursiops truncatus ENSTTRG00000009856 I 0.978
ENSVPAG00000007583 Vicugna pacos ENSVPAG00000007583 I 0.978
ENSXMAG00000002515 Xiphophorus maculatus ENSXMAG00000002515 I 0.844
ENSXMAG00000005637 Xiphophorus maculatus ENSXMAG00000005637 I 0.889
Gfo_R002325 Geospiza fortis Gfo_R002325 I 0.978
Myotis_brandtii_LCOR_10025723 Myotis brandtii Myotis_brandtii_LCOR_10025723 I 0.978
Ogr16502 Ophisaurus gracilis Ogr16502 I 0.978
Pvit_17823 Pogona vitticeps Pvit_17823 I 0.978
Tal_R010723 Tyto alba Tal_R010723 I 0.978
lcorl Xenopus tropicalis XB-GENE-995017 D 0.978