ENSXMAG00000002515 (Xiphophorus maculatus)
Pipsqueak

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF05225 (HTH_psq) IPR007889 ENSXMAG00000002515 T313636_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
ENSORLG00000007805
M02435_2.00 		Oryzias latipes
SCNAAWNNNN
NNNNWTTNGS		 PBM
Weirauch et al.(2014)
pTH9277 		0.932 0.932
ENSGACG00000007469
M02432_2.00 		Gasterosteus aculeatus
NVNMGAWACH
DGTWTCKNBN		 PBM
Weirauch et al.(2014)
pTH9179 		0.909 0.909
ENSACAG00000012432
M02430_2.00 		Anolis carolinensis
NNNCNAAWNN
NNWTTNGNNN		 PBM
Weirauch et al.(2014)
pTH9220 		0.886 0.886
ENSMGAG00000009953
M02433_2.00 		Meleagris gallopavo
NNNYNAAWNN
NNWTTNRNNN		 PBM
Weirauch et al.(2014)
pTH8649 		0.864 0.864
lcorl
M02438_2.00 		Xenopus tropicalis
NYCNAAWHN
NDWTTNGRN		 PBM
Weirauch et al.(2014)
pTH8558 		0.864 0.864
ENSORLG00000000044
M02434_2.00 		Oryzias latipes
CCCAAAWT
AWTTTGGG		 PBM
Weirauch et al.(2014)
pTH9275 		0.818 0.818
For this family, TFs with SR scores > 0.778 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
ENSXMAP00000002515 Pipsqueak 366 410
ENSXMAP00000002517 Pipsqueak 359 403

Links

Other Pipsqueak family TFs
Other Xiphophorus maculatus TFs

70 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
Aan_R012556 Calypte anna Aan_R012556 I 0.844
Afo_R002709 Aptenodytes forsteri Afo_R002709 I 0.844
Alligator_sinensis_CCG020164.1 Alligator sinensis Alligator_sinensis_CCG020164.1 I 0.844
Brh_R001506 Buceros rhinoceros Brh_R001506 I 0.844
Cmyd_10003742 Chelonia mydas Cmyd_10003742 I 0.844
ENSACAG00000012432 Anolis carolinensis ENSACAG00000012432 D 0.886
ENSAMEG00000000186 Ailuropoda melanoleuca ENSAMEG00000000186 I 0.844
ENSAMXG00000021599 Astyanax mexicanus ENSAMXG00000021599 I 0.844
ENSAPLG00000003032 Anas platyrhynchos ENSAPLG00000003032 I 0.844
ENSBTAG00000004029 Bos taurus ENSBTAG00000004029 I 0.844
ENSBTAP00000005261-D1 Bos grunniens ENSBTAP00000005261-D1 I 0.844
ENSCAFG00000008905 Canis familiaris ENSCAFG00000008905 I 0.844
ENSCHOG00000001981 Choloepus hoffmanni ENSCHOG00000001981 I 0.844
ENSCJAG00000016484 Callithrix jacchus ENSCJAG00000016484 I 0.844
ENSCPOG00000005739 Cavia porcellus ENSCPOG00000005739 I 0.844
ENSCSAG00000006043 Chlorocebus sabaeus ENSCSAG00000006043 I 0.844
lcor Danio rerio ENSDARG00000100908 I 0.800
ENSECAG00000013517 Equus caballus ENSECAG00000013517 I 0.844
ENSETEG00000015066 Echinops telfairi ENSETEG00000015066 I 0.844
ENSFALG00000008484 Ficedula albicollis ENSFALG00000008484 I 0.844
ENSFCAG00000028121 Felis catus ENSFCAG00000028121 I 0.844
LCOR Homo sapiens ENSG00000196233 I 0.844
ENSGACG00000007469 Gasterosteus aculeatus ENSGACG00000007469 D 0.909
ENSGALG00000023649 Gallus gallus ENSGALG00000023649 I 0.844
ENSGGOG00000026110 Gorilla gorilla ENSGGOG00000026110 I 0.844
ENSGMOG00000018278 Gadus morhua ENSGMOG00000018278 I 1.000
ENSLACG00000001265 Latimeria chalumnae ENSLACG00000001265 I 0.844
ENSLAFG00000014271 Loxodonta africana ENSLAFG00000014271 I 0.844
ENSLOCG00000012823 Lepisosteus oculatus ENSLOCG00000012823 I 0.822
ENSMGAG00000009953 Meleagris gallopavo ENSMGAG00000009953 D 0.844
ENSMICG00000007572 Microcebus murinus ENSMICG00000007572 I 0.844
ENSMLUG00000000494 Myotis lucifugus ENSMLUG00000000494 I 0.844
ENSMMUG00000010425 Macaca mulatta ENSMMUG00000010425 I 0.844
ENSMODG00000004531 Monodelphis domestica ENSMODG00000004531 I 0.844
Lcor Mus musculus ENSMUSG00000025019 I 0.844
ENSNLEG00000013648 Nomascus leucogenys ENSNLEG00000013648 I 0.844
ENSOARG00000008725 Ovis aries ENSOARG00000008725 I 0.844
ENSOGAG00000008137 Otolemur garnettii ENSOGAG00000008137 I 0.844
ENSONIG00000000255 Oreochromis niloticus ENSONIG00000000255 I 0.800
ENSONIG00000018331 Oreochromis niloticus ENSONIG00000018331 I 0.955
ENSOPRG00000014745 Ochotona princeps ENSOPRG00000014745 I 0.844
ENSORLG00000000044 Oryzias latipes ENSORLG00000000044 D 0.800
ENSORLG00000007805 Oryzias latipes ENSORLG00000007805 D 0.932
ENSP00000360138 Macaca fascicularis ENSP00000360138 I 0.844
ENSPCAG00000007084 Procavia capensis ENSPCAG00000007084 I 0.844
ENSPFOG00000009902 Poecilia formosa ENSPFOG00000009902 I 0.800
ENSPFOG00000013017 Poecilia formosa ENSPFOG00000013017 I 1.000
ENSPSIG00000009179 Pelodiscus sinensis ENSPSIG00000009179 I 0.844
LCOR Pan troglodytes ENSPTRG00000002800 I 0.844
ENSPVAG00000003364 Pteropus vampyrus ENSPVAG00000003364 I 0.844
Lcor Rattus norvegicus ENSRNOG00000042679 I 0.844
ENSSARG00000008230 Sorex araneus ENSSARG00000008230 I 0.844
ENSSHAG00000018667 Sarcophilus harrisii ENSSHAG00000018667 I 0.844
ENSSSCG00000010511 Sus scrofa ENSSSCG00000010511 I 0.844
ENSSTOG00000010808 Ictidomys tridecemlineatus ENSSTOG00000010808 I 0.844
ENSTBEG00000005837 Tupaia belangeri ENSTBEG00000005837 I 0.844
ENSTGUG00000009834 Taeniopygia guttata ENSTGUG00000009834 I 0.844
lcor Tetraodon nigroviridis ENSTNIG00000003614 I 0.822
lcor Takifugu rubripes ENSTRUG00000006194 I 0.822
ENSTRUG00000008704 Takifugu rubripes ENSTRUG00000008704 I 0.932
ENSTTRG00000009856 Tursiops truncatus ENSTTRG00000009856 I 0.844
ENSVPAG00000007583 Vicugna pacos ENSVPAG00000007583 I 0.844
ENSXMAG00000005637 Xiphophorus maculatus ENSXMAG00000005637 I 0.800
Gfo_R002325 Geospiza fortis Gfo_R002325 I 0.844
Myotis_brandtii_LCOR_10025723 Myotis brandtii Myotis_brandtii_LCOR_10025723 I 0.844
Ogr16502 Ophisaurus gracilis Ogr16502 I 0.844
Pvit_17823 Pogona vitticeps Pvit_17823 I 0.844
Tal_R010723 Tyto alba Tal_R010723 I 0.844
lcorl Xenopus tropicalis XB-GENE-995017 D 0.844