PITG_11246 (Phytophthora infestans)
Pipsqueak

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF05225 (HTH_psq) IPR007889 PITG_11246 T314022_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
Phyra78816
M02437_2.00 		Phytophthora ramorum
NNYRNWACAN
NTGTWNYRNN		 PBM
Weirauch et al.(2014)
pTH7817 		0.900 0.900
For this family, TFs with SR scores > 0.778 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
PITG_11246T0 Pipsqueak 275 315

Links

Other Pipsqueak family TFs
Other Phytophthora infestans TFs

9 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
AB01954.1 Alternaria brassicicola AB01954.1 N
COCC4DRAFT_72266 Bipolaris maydis COCC4DRAFT_72266 N
COCCADRAFT_23332 Bipolaris zeicola COCCADRAFT_23332 N
COCMIDRAFT_82445 Bipolaris oryzae COCMIDRAFT_82445 N
COCSADRAFT_192712 Bipolaris sorokiniana COCSADRAFT_192712 N
COCVIDRAFT_12735 Bipolaris victoriae COCVIDRAFT_12735 N
PTRG_08409 Pyrenophora triticirepentis PTRG_08409 N
PTT_06215 Pyrenophora teres PTT_06215 N
SETTUDRAFT_96644 Setosphaeria turcica SETTUDRAFT_96644 N
SNOG_08459 Stagonospora nodorum SNOG_08459 N
SNOG_08459 Phaeosphaeria nodorum SNOG_08459 N