Ogr16502 (Ophisaurus gracilis)
Pipsqueak

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF05225 (HTH_psq) IPR007889 Ogr16502 T314460_2.00 GigaDB (2015-Oct-22)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
ENSMGAG00000009953
M02433_2.00 		Meleagris gallopavo
NNNYNAAWNN
NNWTTNRNNN		 PBM
Weirauch et al.(2014)
pTH8649 		1.000 1.000
ENSACAG00000012432
M02430_2.00 		Anolis carolinensis
NNNCNAAWNN
NNWTTNGNNN		 PBM
Weirauch et al.(2014)
pTH9220 		0.956 0.956
lcorl
M02438_2.00 		Xenopus tropicalis
NYCNAAWHN
NDWTTNGRN		 PBM
Weirauch et al.(2014)
pTH8558 		0.956 0.956
ENSORLG00000000044
M02434_2.00 		Oryzias latipes
CCCAAAWT
AWTTTGGG		 PBM
Weirauch et al.(2014)
pTH9275 		0.911 0.911
ENSGACG00000007469
M02432_2.00 		Gasterosteus aculeatus
NVNMGAWACH
DGTWTCKNBN		 PBM
Weirauch et al.(2014)
pTH9179 		0.822 0.822
ENSORLG00000007805
M02435_2.00 		Oryzias latipes
SCNAAWNNNN
NNNNWTTNGS		 PBM
Weirauch et al.(2014)
pTH9277 		0.822 0.822
LCORL
M02431_2.00 		Choloepus hoffmanni
NNYNAAHNN
NNDTTNRNN		 PBM
Weirauch et al.(2014)
pTH9253 		0.800 0.800
For this family, TFs with SR scores > 0.778 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Ogr16502 Pipsqueak 2036 2081

Links

Other Pipsqueak family TFs
Other Ophisaurus gracilis TFs

74 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
Aan_R012556 Calypte anna Aan_R012556 I 1.000
Afo_R002709 Aptenodytes forsteri Afo_R002709 I 1.000
Alligator_sinensis_CCG020164.1 Alligator sinensis Alligator_sinensis_CCG020164.1 I 1.000
Brh_R001506 Buceros rhinoceros Brh_R001506 I 1.000
Cmyd_10003742 Chelonia mydas Cmyd_10003742 I 1.000
ENSACAG00000012432 Anolis carolinensis ENSACAG00000012432 D 0.956
ENSAMEG00000000186 Ailuropoda melanoleuca ENSAMEG00000000186 I 1.000
ENSAMXG00000021599 Astyanax mexicanus ENSAMXG00000021599 I 0.889
ENSAPLG00000003032 Anas platyrhynchos ENSAPLG00000003032 I 1.000
ENSBTAG00000004029 Bos taurus ENSBTAG00000004029 I 1.000
ENSBTAP00000005261-D1 Bos grunniens ENSBTAP00000005261-D1 I 1.000
ENSCAFG00000008905 Canis familiaris ENSCAFG00000008905 I 1.000
ENSCHOG00000001981 Choloepus hoffmanni ENSCHOG00000001981 I 1.000
LCORL Choloepus hoffmanni ENSCHOG00000006922 D 0.800
ENSCJAG00000016484 Callithrix jacchus ENSCJAG00000016484 I 1.000
ENSCPOG00000005739 Cavia porcellus ENSCPOG00000005739 I 1.000
ENSCSAG00000006043 Chlorocebus sabaeus ENSCSAG00000006043 I 1.000
lcor Danio rerio ENSDARG00000100908 I 0.933
ENSECAG00000013517 Equus caballus ENSECAG00000013517 I 1.000
ENSETEG00000015066 Echinops telfairi ENSETEG00000015066 I 1.000
ENSFALG00000008484 Ficedula albicollis ENSFALG00000008484 I 1.000
ENSFCAG00000028121 Felis catus ENSFCAG00000028121 I 1.000
LCORL Homo sapiens ENSG00000178177 D 0.800
LCOR Homo sapiens ENSG00000196233 I 1.000
ENSGACG00000007469 Gasterosteus aculeatus ENSGACG00000007469 D 0.841
ENSGALG00000023649 Gallus gallus ENSGALG00000023649 I 1.000
ENSGGOG00000026110 Gorilla gorilla ENSGGOG00000026110 I 1.000
ENSGMOG00000018278 Gadus morhua ENSGMOG00000018278 I 0.844
ENSLACG00000001265 Latimeria chalumnae ENSLACG00000001265 I 0.978
ENSLAFG00000014271 Loxodonta africana ENSLAFG00000014271 I 1.000
ENSLOCG00000012823 Lepisosteus oculatus ENSLOCG00000012823 I 0.978
ENSMGAG00000009953 Meleagris gallopavo ENSMGAG00000009953 D 1.000
ENSMICG00000007572 Microcebus murinus ENSMICG00000007572 I 1.000
ENSMLUG00000000494 Myotis lucifugus ENSMLUG00000000494 I 1.000
ENSMMUG00000010425 Macaca mulatta ENSMMUG00000010425 I 1.000
ENSMODG00000004531 Monodelphis domestica ENSMODG00000004531 I 1.000
Lcor Mus musculus ENSMUSG00000025019 I 1.000
ENSNLEG00000013648 Nomascus leucogenys ENSNLEG00000013648 I 1.000
ENSOARG00000008725 Ovis aries ENSOARG00000008725 I 1.000
ENSOGAG00000008137 Otolemur garnettii ENSOGAG00000008137 I 1.000
ENSONIG00000000255 Oreochromis niloticus ENSONIG00000000255 I 0.911
ENSONIG00000018331 Oreochromis niloticus ENSONIG00000018331 I 0.889
ENSOPRG00000014745 Ochotona princeps ENSOPRG00000014745 I 1.000
ENSORLG00000000044 Oryzias latipes ENSORLG00000000044 D 0.911
ENSORLG00000007805 Oryzias latipes ENSORLG00000007805 D 0.822
ENSP00000360138 Macaca fascicularis ENSP00000360138 I 1.000
ENSPCAG00000007084 Procavia capensis ENSPCAG00000007084 I 1.000
ENSPFOG00000009902 Poecilia formosa ENSPFOG00000009902 I 0.911
ENSPFOG00000013017 Poecilia formosa ENSPFOG00000013017 I 0.844
ENSPMAG00000003112 Petromyzon marinus ENSPMAG00000003112 I 0.822
ENSPSIG00000009179 Pelodiscus sinensis ENSPSIG00000009179 I 1.000
LCOR Pan troglodytes ENSPTRG00000002800 I 1.000
ENSPVAG00000003364 Pteropus vampyrus ENSPVAG00000003364 I 1.000
Lcor Rattus norvegicus ENSRNOG00000042679 I 1.000
ENSSARG00000008230 Sorex araneus ENSSARG00000008230 I 1.000
ENSSHAG00000018667 Sarcophilus harrisii ENSSHAG00000018667 I 1.000
ENSSSCG00000010511 Sus scrofa ENSSSCG00000010511 I 1.000
ENSSTOG00000010808 Ictidomys tridecemlineatus ENSSTOG00000010808 I 1.000
ENSTBEG00000005837 Tupaia belangeri ENSTBEG00000005837 I 1.000
LCORL Tupaia belangeri ENSTBEG00000012926 I 0.800
ENSTGUG00000009834 Taeniopygia guttata ENSTGUG00000009834 I 1.000
lcor Tetraodon nigroviridis ENSTNIG00000003614 I 0.933
lcor Takifugu rubripes ENSTRUG00000006194 I 0.939
ENSTRUG00000008704 Takifugu rubripes ENSTRUG00000008704 I 0.909
ENSTTRG00000009856 Tursiops truncatus ENSTTRG00000009856 I 1.000
ENSVPAG00000007583 Vicugna pacos ENSVPAG00000007583 I 1.000
ENSXMAG00000002515 Xiphophorus maculatus ENSXMAG00000002515 I 0.844
ENSXMAG00000005637 Xiphophorus maculatus ENSXMAG00000005637 I 0.911
Gfo_R002325 Geospiza fortis Gfo_R002325 I 1.000
Myotis_brandtii_LCORL_10024398 Myotis brandtii Myotis_brandtii_LCORL_10024398 I 0.800
Myotis_brandtii_LCOR_10025723 Myotis brandtii Myotis_brandtii_LCOR_10025723 I 1.000
Pvit_17823 Pogona vitticeps Pvit_17823 I 1.000
Tal_R010723 Tyto alba Tal_R010723 I 1.000
lcorl Xenopus tropicalis XB-GENE-995017 D 0.956