CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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Sjc_0047120
(
Schistosoma japonicum
)
Pipsqueak
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF05225 (HTH_psq)
IPR007889
Sjc_0047120
T314715_2.00
Misc (2018-Jan-19)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
CPRT0000004438
Pipsqueak
88
131
TQRDMTNAYNAVKYQGMSLRGAATAFNVPESTLRDRVHGRVSLE
Links
Other
Pipsqueak
family TFs
Other
Schistosoma japonicum
TFs
21 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
30190.m010874
Ricinus communis
30190.m010874
N
chr6.LjT03K02.30.nc
Lotus japonicus
chr6.LjT03K02.30.nc
N
Ciclev10016846m.g
Citrus clementina
Ciclev10016846m.g
N
GLYMA13G31211
Glycine max
GLYMA13G31211
N
GLYMA15G08140
Glycine max
GLYMA15G08140
N
Gorai.010G154100
Gossypium raimondii
Gorai.010G154100
N
Gorai.011G028400
Gossypium raimondii
Gorai.011G028400
N
orange1.1g029713m.g
Citrus sinensis
orange1.1g029713m.g
N
TCM_029852
Theobroma cacao
TCM_029852
N