CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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Ciclev10016846m.g
(
Citrus clementina
)
bHLH
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00010 (HLH)
IPR001092
Ciclev10016846m.g
T049510_2.00
JGI:Phytozome (2018-Apr-12)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Ciclev10016846m
bHLH
8
60
SRTDRKTIERNRRNQMKALYSTLNSLVPHQRPMEATSLPDQLDEATKYIKRLQ
Ciclev10016849m
bHLH
8
60
SRTDRKTIERNRRNQMKALYSTLNSLVPHQRPMEATSLPDQLDEATKYIKRLQ
Ciclev10016850m
bHLH
8
60
SRTDRKTIERNRRNQMKALYSTLNSLVPHQRPMEATSLPDQLDEATKYIKRLQ
Links
Other
bHLH
family TFs
Other
Citrus clementina
TFs
11 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
orange1.1g029713m.g
Citrus sinensis
orange1.1g029713m.g
N
0.914
TCM_029852
Theobroma cacao
TCM_029852
N
0.860
GLYMA15G08140
Glycine max
GLYMA15G08140
N
0.849
30190.m010874
Ricinus communis
30190.m010874
N
0.849
Gorai.011G028400
Gossypium raimondii
Gorai.011G028400
N
0.849
SapurV1A.0032s0260
Salix purpurea
SapurV1A.0032s0260
N
0.849
MTR_2g013920
Medicago truncatula
MTR_2g013920
N
0.847
Eucgr.D00616
Eucalyptus grandis
Eucgr.D00616
N
0.842
chr6.LjT03K02.30.nc
Lotus japonicus
chr6.LjT03K02.30.nc
N
0.841
gene02381-v1.0-hybrid
Fragaria vesca
gene02381-v1.0-hybrid
N
0.839