ACAC_0000538501 (Angiostrongylus cantonensis)
Pipsqueak

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF05225 (HTH_psq) IPR007889 ACAC_0000538501 T314990_2.00 WormBase:ParaSite (2015-Oct-22)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
nasonia_NCBI_hmm1312624
M02436_2.00 		Nasonia vitripennis
NNNYNAAWNN
NNWTTNRNNN		 PBM
Weirauch et al.(2014)
pTH9266 		0.862 0.862
Eip93F
M06443_2.00 		Drosophila melanogaster
VCHSCCRAAAWT
AWTTTYGGSDGB		 B1H
Zhu et al.(2011)
Eip93F_SANGER_10_FBgn0013948 		0.862 0.862
Minc10479
M02439_2.00 		Meloidogyne incognita
NCCSAAWTTN
NAAWTTSGGN		 PBM
Weirauch et al.(2014)
pTH9213 		0.828 0.828
For this family, TFs with SR scores > 0.778 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
ACAC_0000538501-mRNA-1 Pipsqueak 1 30

Links

Other Pipsqueak family TFs
Other Angiostrongylus cantonensis TFs

10 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
COCSADRAFT_123761 Bipolaris sorokiniana COCSADRAFT_123761 N
SETTUDRAFT_156783 Setosphaeria turcica SETTUDRAFT_156783 N
SNOG_06844 Phaeosphaeria nodorum SNOG_06844 N