NECAME_06709 (Necator americanus)
Pipsqueak

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF05225 (HTH_psq) IPR007889 NECAME_06709 T315080_2.00 WormBase:ParaSite (2015-Oct-22)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
mbr-1
M00707_2.00 		Caenorhabditis elegans
NRNGGGCCDN
NHGGCCCNYN		 PBM
Narasimhan et al.(2015)
pTH10031 		0.850 0.850
For this family, TFs with SR scores > 0.778 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
NECAME_06709 Pipsqueak 240 283

Links

Other Pipsqueak family TFs
Other Necator americanus TFs

9 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
estExt_fgenesh1_kg.C_140377 Phytophthora capsici estExt_fgenesh1_kg.C_140377 I
fgenesh_scip_prom.28083.10252 Phytophthora lateralis fgenesh_scip_prom.28083.10252 I
fgenesh_scip_prom.46568.1708 Phytophthora kernoviae fgenesh_scip_prom.46568.1708 I
Phyra78816 Phytophthora ramorum Phyra78816 D
Phyra95221 Phytophthora ramorum Phyra95221 I
Physo143675 Phytophthora sojae Physo143675 I
Physo143676 Phytophthora sojae Physo143676 I
PITG_00015 Phytophthora infestans PITG_00015 I
PITG_00016 Phytophthora infestans PITG_00016 I