CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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Bra016441
(
Brassica rapa
)
PLATZ
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF04640 (PLATZ)
IPR006734
Bra016441
T315274_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Bra016441.1-P
PLATZ
68
139
RRSSYHNVVRVNEIQKYIDISCVQTYIINSARIVFLNERPQPRIGKGVTNTCEICCRSLLDSFRFCSLGCKL
Links
Other
PLATZ
family TFs
Other
Brassica rapa
TFs
304 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
ANCCAN_07722
Ancylostoma caninum
ANCCAN_07722
N
ANCCEY_03457
Ancylostoma ceylanicum
ANCCEY_03457
N
ASIM_0000091301
Anisakis simplex
ASIM_0000091301
I
BGLB011859
Biomphalaria glabrata
BGLB011859
I
Bm5383
Brugia malayi
Bm5383
I
BTMF_0000942101
Brugia timori
BTMF_0000942101
I
BXY_1512700
Bursaphelenchus xylophilus
BXY_1512700
N
DME_0000390001
Dracunculus medinensis
DME_0000390001
N
GPUH_0002149301
Gongylonema pulchrum
GPUH_0002149301
I
GPUH_0002623401
Gongylonema pulchrum
GPUH_0002623401
I
HCOI00251100
Haemonchus contortus
HCOI00251100
N
HCOI01543700
Haemonchus contortus
HCOI01543700
N
HDID_0000526701
Hymenolepis diminuta
HDID_0000526701
I
HmN_000026900
Hymenolepis microstoma
HmN_000026900
I
HNAJ_0000459401
Hymenolepis nana
HNAJ_0000459401
I
HPLM_0002015601
Haemonchus placei
HPLM_0002015601
N
maker-nMf.1.1.scaf00076-augustus-gene-0.21
Meloidogyne floridensis
maker-nMf.1.1.scaf00076-augustus-gene-0.21
N
Minc06478
Meloidogyne incognita
Minc06478
N
nAv.1.0.1.g00979
Acanthocheilonema viteae
nAv.1.0.1.g00979
I
nDi.2.2.2.g04365
Dirofilaria immitis
nDi.2.2.2.g04365
I
nLs.2.1.2.g04119
Litomosoides sigmodontis
nLs.2.1.2.g04119
I
nOo.2.0.1.g11302
Onchocerca ochengi
nOo.2.0.1.g11302
I
nRc.2.0.1.g02634
Romanomermis culicivorax
nRc.2.0.1.g02634
I
PTRK_0000297300
Parastrongyloides trichosuri
PTRK_0000297300
N
RSKR_0000082500
Rhabditophanes kr3021
RSKR_0000082500
N
SMUV_0000477801
Syphacia muris
SMUV_0000477801
N
SPAL_0001290200
Strongyloides papillosus
SPAL_0001290200
N
SVE_0161800
Strongyloides venezuelensis
SVE_0161800
N
SVUK_0000145101
Strongylus vulgaris
SVUK_0000145101
N
WBGene00246233
Onchocerca volvulus
WBGene00246233
I
WUBG_01190
Wuchereria bancrofti
WUBG_01190
I