CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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PTRK_0000297300
(
Parastrongyloides trichosuri
)
SMAD
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF03165 (MH1)
IPR003619
PTRK_0000297300
T325870_2.00
WormBase:ParaSite (2015-Oct-22)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
PTRK_0000297300.1
SMAD
29
132
SKKAIDSLVKKLQKHNRNALLLLEETLKSEGRQPSECITIPRSLDGRLQISHRKALPHVIYCRVYRWPDLQSHHELKAIESCRYCYESGQKEICINPYHYQRVE
Links
Other
SMAD
family TFs
Other
Parastrongyloides trichosuri
TFs
48 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
SSTP_0000571600
Strongyloides stercoralis
SSTP_0000571600
N
0.981
SPAL_0001290200
Strongyloides papillosus
SPAL_0001290200
N
0.971
SVE_0161800
Strongyloides venezuelensis
SVE_0161800
N
0.951
RSKR_0000082500
Rhabditophanes kr3021
RSKR_0000082500
N
0.932
NBR_0000522801
Nippostrongylus brasiliensis
NBR_0000522801
I
0.920
BXY_1512700
Bursaphelenchus xylophilus
BXY_1512700
N
0.864
L893_g15060
Steinernema glaseri
L893_g15060
N
0.864
NECAME_19535
Necator americanus
NECAME_19535
N
0.857
L898_g14583
Steinernema monticolum
L898_g14583
N
0.854
ASU_06962
Ascaris suum
ASU_06962
N
0.845
DME_0000390001
Dracunculus medinensis
DME_0000390001
N
0.845
L596_g26009
Steinernema carpocapsae
L596_g26009
N
0.835
Ppa-sma-2
Pristionchus pacificus
PPA15247
N
0.830
WUBG_02400
Wuchereria bancrofti
WUBG_02400
N
0.825
Bm7459
Brugia malayi
Bm7459
N
0.825
LOAG_01471
Loa loa
LOAG_01471
N
0.825
WBGene00245189
Onchocerca volvulus
WBGene00245189
N
0.825
BTMF_0000953701
Brugia timori
BTMF_0000953701
N
0.825
EEL_0000068901
Elaeophora elaphi
EEL_0000068901
N
0.825
EVEC_0000636701
Enterobius vermicularis
EVEC_0000636701
N
0.825
L892_g4529
Steinernema scapterisci
L892_g4529
N
0.825
nAv.1.0.1.g05112
Acanthocheilonema viteae
nAv.1.0.1.g05112
N
0.825
nLs.2.1.2.g02003
Litomosoides sigmodontis
nLs.2.1.2.g02003
N
0.825
nOo.2.0.1.g00974
Onchocerca ochengi
nOo.2.0.1.g00974
N
0.825
OFLC_0000052301
Onchocerca flexuosa
OFLC_0000052301
N
0.825
HCOI00251100
Haemonchus contortus
HCOI00251100
N
0.816
HCOI01543700
Haemonchus contortus
HCOI01543700
N
0.816
NBR_0000271401
Nippostrongylus brasiliensis
NBR_0000271401
N
0.816
TCLT_0000791701
Thelazia callipaeda
TCLT_0000791701
N
0.816
SMUV_0000477801
Syphacia muris
SMUV_0000477801
N
0.806
Hba_13214
Heterorhabditis bacteriophora
Hba_13214
N
0.805
CBG06922
Caenorhabditis briggsae
CBG06922
N
0.796
CRE15772
Caenorhabditis remanei
CRE15772
N
0.796
sma-2
Caenorhabditis elegans
WBGene00004856
N
0.796
ANCDUO_02619
Ancylostoma duodenale
ANCDUO_02619
N
0.787
Minc06478
Meloidogyne incognita
Minc06478
N
0.767
maker-nMf.1.1.scaf00076-augustus-gene-0.21
Meloidogyne floridensis
maker-nMf.1.1.scaf00076-augustus-gene-0.21
N
0.757
SMAD1
Ochotona princeps
ENSOPRG00000012775
I
0.750
ENSAPLG00000004964
Anas platyrhynchos
ENSAPLG00000004964
I
0.746
ENSMGAG00000001351
Meleagris gallopavo
ENSMGAG00000001351
I
0.734
HPBE_0002664601
Heligmosomoides bakeri
HPBE_0002664601
N
0.716
ENSAPLG00000007006
Anas platyrhynchos
ENSAPLG00000007006
I
0.714
ENSPSIG00000010579
Pelodiscus sinensis
ENSPSIG00000010579
I
0.714
Brh_R001115
Buceros rhinoceros
Brh_R001115
I
0.714
Tal_R001210
Tyto alba
Tal_R001210
I
0.714
nDi.2.2.2.g00640
Dirofilaria immitis
nDi.2.2.2.g00640
N
0.708
Sakowv30032201m.g
Saccoglossus kowalevskii
Sakowv30032201m.g
I
0.703
ENSSTOG00000010836
Ictidomys tridecemlineatus
ENSSTOG00000010836
I
0.702