CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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Ppa-sma-2
(
Pristionchus pacificus
)
SMAD
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF03165 (MH1)
IPR003619
PPA15247
T325178_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
PPA15247
SMAD
2
54
AFRALPHVIYCRVYRWPDLQSHHELKAIETCMFCYESGQKEICINPYHYSRID
Links
Other
SMAD
family TFs
Other
Pristionchus pacificus
TFs
20 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
NBR_0000522801
Nippostrongylus brasiliensis
NBR_0000522801
I
0.860
BXY_1512700
Bursaphelenchus xylophilus
BXY_1512700
N
0.849
SPAL_0001290200
Strongyloides papillosus
SPAL_0001290200
N
0.849
SVE_0161800
Strongyloides venezuelensis
SVE_0161800
N
0.849
PTRK_0000297300
Parastrongyloides trichosuri
PTRK_0000297300
N
0.830
RSKR_0000082500
Rhabditophanes kr3021
RSKR_0000082500
N
0.830
CBN23383
Caenorhabditis brenneri
CBN23383
N
0.811
ANCCAN_07722
Ancylostoma caninum
ANCCAN_07722
N
0.811
DME_0000390001
Dracunculus medinensis
DME_0000390001
N
0.811
HCOI00251100
Haemonchus contortus
HCOI00251100
N
0.811
HCOI01543700
Haemonchus contortus
HCOI01543700
N
0.811
HPLM_0002015601
Haemonchus placei
HPLM_0002015601
N
0.811
ASIM_0000091301
Anisakis simplex
ASIM_0000091301
I
0.792
L892_g4529
Steinernema scapterisci
L892_g4529
N
0.792
Minc06478
Meloidogyne incognita
Minc06478
N
0.774
EVEC_0000636701
Enterobius vermicularis
EVEC_0000636701
N
0.774
ML093050a
Mnemiopsis leidyi
ML093050a
I
0.755
maker-nMf.1.1.scaf00076-augustus-gene-0.21
Meloidogyne floridensis
maker-nMf.1.1.scaf00076-augustus-gene-0.21
N
0.755
SMUV_0000477801
Syphacia muris
SMUV_0000477801
N
0.755
ANCDUO_02619
Ancylostoma duodenale
ANCDUO_02619
N
0.721