Pavir.J05501 (Panicum virgatum)
PLATZ

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF04640 (PLATZ) IPR006734 Pavir.J05501 T316153_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
Pavir.J05501.1.p PLATZ 108 188

Links

Other PLATZ family TFs
Other Panicum virgatum TFs

150 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
29625.m000702 Ricinus communis 29625.m000702 I
30170.m013868 Ricinus communis 30170.m013868 I
AMTR_s00101p00038080 Amborella trichopoda AMTR_s00101p00038080 I
AMTR_s00114p00031980 Amborella trichopoda AMTR_s00114p00031980 I
AMTR_s00132p00065700 Amborella trichopoda AMTR_s00132p00065700 I
Aquca_007_00660 Aquilegia coerulea Aquca_007_00660 I
Aquca_072_00142 Aquilegia coerulea Aquca_072_00142 I
ABF2 Arabidopsis thaliana AT1G45249 D
ABI5 Arabidopsis thaliana AT2G36270 D
DPBF3 Arabidopsis thaliana AT3G56850 D
BGIOSGA004837 Oryza indica BGIOSGA004837 I
BGIOSGA010835 Oryza indica BGIOSGA010835 I
BGIOSGA020087 Oryza indica BGIOSGA020087 I
BGIOSGA026419 Oryza indica BGIOSGA026419 I
BGIOSGA028831 Oryza indica BGIOSGA028831 I
Bo6g006970 Brassica oleracea Bo6g006970 I
Bostr.12302s0127 Boechera stricta Bostr.12302s0127 I
Bostr.20505s0068 Boechera stricta Bostr.20505s0068 I
Bra040260 Brassica rapa Bra040260 I
BRADI3G38200 Brachypodium distachyon BRADI3G38200 I
BRADI4G43850 Brachypodium distachyon BRADI4G43850 I
Cagra.0578s0014 Capsella grandiflora Cagra.0578s0014 I
Cagra.10917s0002 Capsella grandiflora Cagra.10917s0002 I
Carubv10009177m.g Capsella rubella Carubv10009177m.g I
Carubv10018770m.g Capsella rubella Carubv10018770m.g I
cassava11518.m1 Manihot esculenta cassava11518.m1 I
cassava12275.valid.m1 Manihot esculenta cassava12275.valid.m1 I
cassava22423.valid.m1 Manihot esculenta cassava22423.valid.m1 I
cassava32856.m1 Manihot esculenta cassava32856.m1 I
cassava42669.valid.m1 Manihot esculenta cassava42669.valid.m1 I
Ca_00791 Cicer arietinum Ca_00791 I
Ca_01548 Cicer arietinum Ca_01548 I
Ca_08143 Cicer arietinum Ca_08143 I
chr1.CM0010.310.nd Lotus japonicus chr1.CM0010.310.nd I
Ciclev10001159m.g Citrus clementina Ciclev10001159m.g I
Ciclev10001893m.g Citrus clementina Ciclev10001893m.g I
Ciclev10012205m.g Citrus clementina Ciclev10012205m.g I
Cla013878 Citrullus lanatus Cla013878 I
Cla017970 Citrullus lanatus Cla017970 I
Cla022926 Citrullus lanatus Cla022926 I
Cucsa.241090 Cucumis sativus Cucsa.241090 I
Cucsa.364380 Cucumis sativus Cucsa.364380 I
Cucsa.385090 Cucumis sativus Cucsa.385090 I
Cucsa.396070 Cucumis sativus Cucsa.396070 I
Eucgr.F02337 Eucalyptus grandis Eucgr.F02337 I
Eucgr.J00320 Eucalyptus grandis Eucgr.J00320 I
evm.TU.supercontig_49.26 Carica papaya evm.TU.supercontig_49.26 I
evm.TU.supercontig_5.28 Carica papaya evm.TU.supercontig_5.28 I
F775_19301 Aegilops tauschii F775_19301 I
F775_31964 Aegilops tauschii F775_31964 I
F775_32479 Aegilops tauschii F775_32479 I
F775_43558 Aegilops tauschii F775_43558 I
ABF2 Arabidopsis lyrata fgenesh2_kg.1__3804__AT1G45249.1 I
gene00393-v1.0-hybrid Fragaria vesca gene00393-v1.0-hybrid I
gene09110-v1.0-hybrid Fragaria vesca gene09110-v1.0-hybrid I
gene30280-v1.0-hybrid Fragaria vesca gene30280-v1.0-hybrid I
GLYMA03G00580 Glycine max GLYMA03G00580 I
GLYMA04G04170 Glycine max GLYMA04G04170 I
GLYMA06G04353 Glycine max GLYMA06G04353 I
GLYMA08G24340 Glycine max GLYMA08G24340 I
GLYMA10G08370 Glycine max GLYMA10G08370 I
GLYMA13G22061 Glycine max GLYMA13G22061 I
GLYMA15G35080 Glycine max GLYMA15G35080 I
GLYMA19G30230 Glycine max GLYMA19G30230 I
GLYMA19G37910 Glycine max GLYMA19G37910 I
Gorai.002G240500 Gossypium raimondii Gorai.002G240500 I
Gorai.005G102300 Gossypium raimondii Gorai.005G102300 I
Gorai.006G155600 Gossypium raimondii Gorai.006G155600 I
Gorai.009G212600 Gossypium raimondii Gorai.009G212600 I
Gorai.009G275700 Gossypium raimondii Gorai.009G275700 I
Gorai.009G301200 Gossypium raimondii Gorai.009G301200 I
Gorai.009G301400 Gossypium raimondii Gorai.009G301400 I
GRMZM2G002075 Zea mays GRMZM2G002075 I
GRMZM2G157722 Zea mays GRMZM2G157722 I
GRMZM2G161009 Zea mays GRMZM2G161009 I
GRMZM2G168079 Zea mays GRMZM2G168079 I
GRMZM2G478417 Zea mays GRMZM2G478417 I
GSMUA_Achr3G22710_001 Musa acuminata GSMUA_Achr3G22710_001 I
GSMUA_Achr6G04270_001 Musa acuminata GSMUA_Achr6G04270_001 I
GSMUA_Achr6G30550_001 Musa acuminata GSMUA_Achr6G30550_001 I
GSMUA_Achr8G07740_001 Musa acuminata GSMUA_Achr8G07740_001 I
LjT07K13.110.nd Lotus japonicus LjT07K13.110.nd I
LPERR01G32620 Leersia perrieri LPERR01G32620 I
LPERR05G16840 Leersia perrieri LPERR05G16840 I
LPERR08G14740 Leersia perrieri LPERR08G14740 I
Lus10008927.g Linum usitatissimum Lus10008927.g I
Lus10009755.g Linum usitatissimum Lus10009755.g I
Lus10014194.g Linum usitatissimum Lus10014194.g I
Lus10017049.g Linum usitatissimum Lus10017049.g I
Lus10021369.g Linum usitatissimum Lus10021369.g I
Lus10022720.g Linum usitatissimum Lus10022720.g I
Lus10028889.g Linum usitatissimum Lus10028889.g I
MDP0000144105 Malus domestica MDP0000144105 I
MDP0000177486 Malus domestica MDP0000177486 I
MDP0000215106 Malus domestica MDP0000215106 I
MDP0000231542 Malus domestica MDP0000231542 I
MDP0000296303 Malus domestica MDP0000296303 I
MDP0000701734 Malus domestica MDP0000701734 I
MDP0000740787 Malus domestica MDP0000740787 I
mgf002176m Mimulus guttatus mgf002176m I
mgf011003m Mimulus guttatus mgf011003m I
mgf015092m Mimulus guttatus mgf015092m I
mgf020824m Mimulus guttatus mgf020824m I
MLOC_34679 Hordeum vulgare MLOC_34679 I
MLOC_61490 Hordeum vulgare MLOC_61490 I
MLOC_6534 Hordeum vulgare MLOC_6534 I
MTR_3g101780 Medicago truncatula MTR_3g101780 I
MTR_7g088090 Medicago truncatula MTR_7g088090 I
MTR_7g104480 Medicago truncatula MTR_7g104480 I
OB01G46760 Oryza brachyantha OB01G46760 I
OB05G28440 Oryza brachyantha OB05G28440 I
OB07G32300 Oryza brachyantha OB07G32300 I
OB08G24950 Oryza brachyantha OB08G24950 I
OBART01G37980 Oryza barthii OBART01G37980 I
OBART05G21000 Oryza barthii OBART05G21000 I
OBART07G26790 Oryza barthii OBART07G26790 I
OGLUM01G42150 Oryza glumaepatula OGLUM01G42150 I
OGLUM03G15730 Oryza glumaepatula OGLUM03G15730 I
OGLUM05G22240 Oryza glumaepatula OGLUM05G22240 I
OGLUM07G26780 Oryza glumaepatula OGLUM07G26780 I
OGLUM08G18640 Oryza glumaepatula OGLUM08G18640 I
OLONG_003399 Oryza longistaminata OLONG_003399 I
OLONG_014546 Oryza longistaminata OLONG_014546 I
OMERI01G34950 Oryza meridionalis OMERI01G34950 I
OMERI03G14020 Oryza meridionalis OMERI03G14020 I
OMERI05G18990 Oryza meridionalis OMERI05G18990 I
OMERI07G23410 Oryza meridionalis OMERI07G23410 I
ONIVA03G16560 Oryza nivara ONIVA03G16560 I
ONIVA04G25730 Oryza nivara ONIVA04G25730 I
ONIVA05G21710 Oryza nivara ONIVA05G21710 I
ONIVA07G26520 Oryza nivara ONIVA07G26520 I
OPUNC01G33790 Oryza punctata OPUNC01G33790 I
OPUNC05G18710 Oryza punctata OPUNC05G18710 I
OPUNC07G25180 Oryza punctata OPUNC07G25180 I
OPUNC08G15700 Oryza punctata OPUNC08G15700 I
orange1.1g020697m.g Citrus sinensis orange1.1g020697m.g I
orange1.1g021146m.g Citrus sinensis orange1.1g021146m.g I
orange1.1g021624m.g Citrus sinensis orange1.1g021624m.g I
orange1.1g025340m.g Citrus sinensis orange1.1g025340m.g I
ORGLA01G0317900 Oryza glaberrima ORGLA01G0317900 I
ORGLA03G0149400 Oryza glaberrima ORGLA03G0149400 I
ORGLA08G0211300 Oryza glaberrima ORGLA08G0211300 I
ORUFI01G41310 Oryza rufipogon ORUFI01G41310 I
ORUFI05G22290 Oryza rufipogon ORUFI05G22290 I
ORUFI07G27740 Oryza rufipogon ORUFI07G27740 I
ORUFI08G19970 Oryza rufipogon ORUFI08G19970 I
OS01G0859300 Oryza sativa OS01G0859300 I
OS03G0322700 Oryza sativa OS03G0322700 I
OS05G0489700 Oryza sativa OS05G0489700 I
OS07G0686100 Oryza sativa OS07G0686100 I
OS08G0471950 Oryza sativa OS08G0471950 D
Pavir.Ba00263 Panicum virgatum Pavir.Ba00263 I
Pavir.Bb03699 Panicum virgatum Pavir.Bb03699 I
Pavir.J35078 Panicum virgatum Pavir.J35078 I
PGSC0003DMG400002660 Solanum tuberosum PGSC0003DMG400002660 I
PGSC0003DMG400008011 Solanum tuberosum PGSC0003DMG400008011 I
PGSC0003DMG400028121 Solanum tuberosum PGSC0003DMG400028121 I
Pm005288 Prunus mume Pm005288 I
Pm016826 Prunus mume Pm016826 I
Pm026185 Prunus mume Pm026185 I
POPTR_0002s12710 Populus trichocarpa POPTR_0002s12710 I
ABI5 Populus trichocarpa POPTR_0006s08300 I
POPTR_0008s01130 Populus trichocarpa POPTR_0008s01130 I
POPTR_0010s25440 Populus trichocarpa POPTR_0010s25440 I
POPTR_0010s25460 Populus trichocarpa POPTR_0010s25460 I
POPTR_0014s02810 Populus trichocarpa POPTR_0014s02810 I
PRUPE_ppa006503mg Prunus persica PRUPE_ppa006503mg I
PRUPE_ppa008716mg Prunus persica PRUPE_ppa008716mg I
SapurV1A.0001s2050 Salix purpurea SapurV1A.0001s2050 I
SapurV1A.0036s0930 Salix purpurea SapurV1A.0036s0930 I
SapurV1A.0036s0950 Salix purpurea SapurV1A.0036s0950 I
SapurV1A.0070s0720 Salix purpurea SapurV1A.0070s0720 I
SapurV1A.0167s0060 Salix purpurea SapurV1A.0167s0060 I
SapurV1A.0878s0160 Salix purpurea SapurV1A.0878s0160 I
Sb03g040510 Sorghum bicolor Sb03g040510 I
Sb07g022965 Sorghum bicolor Sb07g022965 I
Sb09g023920 Sorghum bicolor Sb09g023920 I
AREB3 Arabidopsis lyrata scaffold_502836.1 I
SELMODRAFT_177659 Selaginella moellendorffii SELMODRAFT_177659 I
SELMODRAFT_266892 Selaginella moellendorffii SELMODRAFT_266892 I
SELMODRAFT_428822 Selaginella moellendorffii SELMODRAFT_428822 I
SELMODRAFT_443424 Selaginella moellendorffii SELMODRAFT_443424 I
SELMODRAFT_91900 Selaginella moellendorffii SELMODRAFT_91900 I
SELMODRAFT_94516 Selaginella moellendorffii SELMODRAFT_94516 I
Si001731m.g Setaria italica Si001731m.g I
Solyc04g078840.2 Solanum lycopersicum Solyc04g078840.2 I
Solyc09g009490.2 Solanum lycopersicum Solyc09g009490.2 I
Solyc10g081350.1 Solanum lycopersicum Solyc10g081350.1 I
TCM_022574 Theobroma cacao TCM_022574 I
TCM_033824 Theobroma cacao TCM_033824 I
TCM_044596 Theobroma cacao TCM_044596 I
Thhalv10006121m.g Eutrema salsugineum Thhalv10006121m.g I
Thhalv10011493m.g Eutrema salsugineum Thhalv10011493m.g I
TRAES3BF099600130CFD_g Triticum aestivum TRAES3BF099600130CFD_g I
TRAES3BF111600130CFD_g Triticum aestivum TRAES3BF111600130CFD_g I
TRAES3BF111600160CFD_g Triticum aestivum TRAES3BF111600160CFD_g I
Traes_1DL_D9BA83221 Triticum aestivum Traes_1DL_D9BA83221 I
Traes_3AL_58F294736 Triticum aestivum Traes_3AL_58F294736 I
Traes_3AL_FC5523394 Triticum aestivum Traes_3AL_FC5523394 I
Traes_3DL_E21790878 Triticum aestivum Traes_3DL_E21790878 I
Traes_4AS_F9C171219 Triticum aestivum Traes_4AS_F9C171219 I
Traes_4BL_4C9A415F3 Triticum aestivum Traes_4BL_4C9A415F3 I
Traes_4DL_F38ED7FB6 Triticum aestivum Traes_4DL_F38ED7FB6 I
TRIUR3_06726 Triticum urartu TRIUR3_06726 I
TRIUR3_12792 Triticum urartu TRIUR3_12792 I
TRIUR3_15490 Triticum urartu TRIUR3_15490 I
TRIUR3_21253 Triticum urartu TRIUR3_21253 I
TRIUR3_29638 Triticum urartu TRIUR3_29638 I
TRIUR3_31111 Triticum urartu TRIUR3_31111 I
TRIUR3_33995 Triticum urartu TRIUR3_33995 I
DPBF2 Vitis vinifera VIT_06s0080g00340 I
VIT_13s0175g00120 Vitis vinifera VIT_13s0175g00120 I
VIT_18s0001g04500 Vitis vinifera VIT_18s0001g04500 I