Pavir.J05501 (Panicum virgatum)
PLATZ

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF04640 (PLATZ) IPR006734 Pavir.J05501 T316153_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
Pavir.J05501.1.p PLATZ 108 188

Links

Other PLATZ family TFs
Other Panicum virgatum TFs

150 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
Sb01g028260 Sorghum bicolor Sb01g028260 N 0.951
GRMZM2G093270 Zea mays GRMZM2G093270 N 0.938
Traes_1BL_C202F3DE1 Triticum aestivum Traes_1BL_C202F3DE1 N 0.938
GRMZM2G094168 Zea mays GRMZM2G094168 N 0.935
Si035718m.g Setaria italica Si035718m.g N 0.911
PK10752.1 Cannabis sativa PK10752.1 N 0.882
Traes_1AL_791D3B325 Triticum aestivum Traes_1AL_791D3B325 N 0.873
BGIOSGA031347 Oryza indica BGIOSGA031347 N 0.849
OGLUM10G19490 Oryza glumaepatula OGLUM10G19490 N 0.849
OLONG_011823 Oryza longistaminata OLONG_011823 N 0.849
ONIVA10G22010 Oryza nivara ONIVA10G22010 N 0.849
ORGLA10G0145900 Oryza glaberrima ORGLA10G0145900 N 0.849
ORUFI10G20640 Oryza rufipogon ORUFI10G20640 N 0.849
OS10G0574700 Oryza sativa OS10G0574700 N 0.849
OB10G26540 Oryza brachyantha OB10G26540 N 0.847
BRADI3G34160 Brachypodium distachyon BRADI3G34160 N 0.802
LPERR04G19240 Leersia perrieri LPERR04G19240 N 0.778
OPUNC10G17840 Oryza punctata OPUNC10G17840 N 0.778
Ciclev10012712m.g Citrus clementina Ciclev10012712m.g N 0.778
orange1.1g027730m.g Citrus sinensis orange1.1g027730m.g N 0.778
GLYMA09G33770 Glycine max GLYMA09G33770 N 0.764
GRMZM2G086403 Zea mays GRMZM2G086403 N 0.764
GRMZM2G091044 Zea mays GRMZM2G091044 N 0.764
MTR_5g030130 Medicago truncatula MTR_5g030130 N 0.764
POPTR_0001s02390 Populus trichocarpa POPTR_0001s02390 N 0.764
POPTR_0003s09160 Populus trichocarpa POPTR_0003s09160 N 0.764
Sb04g031230 Sorghum bicolor Sb04g031230 N 0.764
Traes_6DL_CF3557CFC Triticum aestivum Traes_6DL_CF3557CFC N 0.764
TRIUR3_30366 Triticum urartu TRIUR3_30366 N 0.764
30054.m000824 Ricinus communis 30054.m000824 N 0.764
cassava37607.valid.m1 Manihot esculenta cassava37607.valid.m1 N 0.764
Gorai.003G183000 Gossypium raimondii Gorai.003G183000 N 0.764
Pavir.Aa01152 Panicum virgatum Pavir.Aa01152 N 0.764
Pavir.Ab01769 Panicum virgatum Pavir.Ab01769 N 0.764
SapurV1A.0226s0270 Salix purpurea SapurV1A.0226s0270 N 0.764
LPERR10G15280 Leersia perrieri LPERR10G15280 N 0.762
Al_scaffold_0001_3341 Arabidopsis lyrata Al_scaffold_0001_3341 N 0.750
AT1G32700 Arabidopsis thaliana AT1G32700 N 0.750
BGIOSGA005806 Oryza indica BGIOSGA005806 N 0.750
BGIOSGA014451 Oryza indica BGIOSGA014451 N 0.750
GLYMA01G02180 Glycine max GLYMA01G02180 N 0.750
GRMZM2G004548 Zea mays GRMZM2G004548 N 0.750
GSMUA_Achr11G17810_001 Musa acuminata GSMUA_Achr11G17810_001 N 0.750
GSMUA_Achr4G27280_001 Musa acuminata GSMUA_Achr4G27280_001 N 0.750
GSMUA_Achr5G03420_001 Musa acuminata GSMUA_Achr5G03420_001 N 0.750
GSMUA_Achr5G18120_001 Musa acuminata GSMUA_Achr5G18120_001 N 0.750
LPERR02G23300 Leersia perrieri LPERR02G23300 N 0.750
MLOC_63157 Hordeum vulgare MLOC_63157 N 0.750
MLOC_69202 Hordeum vulgare MLOC_69202 N 0.750
OB02G35810 Oryza brachyantha OB02G35810 N 0.750
OB04G30420 Oryza brachyantha OB04G30420 N 0.750
OBART02G28660 Oryza barthii OBART02G28660 N 0.750
OBART04G23520 Oryza barthii OBART04G23520 N 0.750
OGLUM02G29250 Oryza glumaepatula OGLUM02G29250 N 0.750
OGLUM04G23440 Oryza glumaepatula OGLUM04G23440 N 0.750
OLONG_023395 Oryza longistaminata OLONG_023395 N 0.750
ONIVA02G31400 Oryza nivara ONIVA02G31400 N 0.750
ONIVA04G22750 Oryza nivara ONIVA04G22750 N 0.750
OPUNC02G26310 Oryza punctata OPUNC02G26310 N 0.750
OPUNC04G21040 Oryza punctata OPUNC04G21040 N 0.750
ORGLA02G0246600 Oryza glaberrima ORGLA02G0246600 N 0.750
ORGLA04G0200500 Oryza glaberrima ORGLA04G0200500 N 0.750
ORUFI02G30220 Oryza rufipogon ORUFI02G30220 N 0.750
ORUFI04G25190 Oryza rufipogon ORUFI04G25190 N 0.750
OS02G0692700 Oryza sativa OS02G0692700 N 0.750
OS04G0591100 Oryza sativa OS04G0591100 N 0.750
Sb06g027000 Sorghum bicolor Sb06g027000 N 0.750
Si010911m.g Setaria italica Si010911m.g N 0.750
TCM_022356 Theobroma cacao TCM_022356 N 0.750
VIT_02s0012g01400 Vitis vinifera VIT_02s0012g01400 N 0.750
Ca_11505 Cicer arietinum Ca_11505 N 0.750
Cla008966 Citrullus lanatus Cla008966 N 0.750
Cla016461 Citrullus lanatus Cla016461 N 0.750
Cucsa.313040 Cucumis sativus Cucsa.313040 N 0.750
Cucsa.321900 Cucumis sativus Cucsa.321900 N 0.750
estExt_gwp_gw1.C_1330066 Physcomitrella patens estExt_gwp_gw1.C_1330066 N 0.750
fgenesh1_pg.scaffold_102000043 Physcomitrella patens fgenesh1_pg.scaffold_102000043 N 0.750
Aquca_009_01064 Aquilegia coerulea Aquca_009_01064 N 0.750
Bostr.3359s0088 Boechera stricta Bostr.3359s0088 N 0.750
Cagra.4962s0001 Capsella grandiflora Cagra.4962s0001 N 0.750
Carubv10009979m.g Capsella rubella Carubv10009979m.g N 0.750
Eucgr.D02206 Eucalyptus grandis Eucgr.D02206 N 0.750
Eucgr.E00276 Eucalyptus grandis Eucgr.E00276 N 0.750
Gorai.006G217100 Gossypium raimondii Gorai.006G217100 N 0.750
Lus10004577.g Linum usitatissimum Lus10004577.g N 0.750
Lus10030968.g Linum usitatissimum Lus10030968.g N 0.750
Lus10040082.g Linum usitatissimum Lus10040082.g N 0.750
Pavir.Ga00766 Panicum virgatum Pavir.Ga00766 N 0.750
Pavir.Gb00818 Panicum virgatum Pavir.Gb00818 N 0.750
PK20928.1 Cannabis sativa PK20928.1 N 0.750
Bo8g028900 Brassica oleracea Bo8g028900 N 0.736
Bra035494 Brassica rapa Bra035494 N 0.736
GLYMA08G36641 Glycine max GLYMA08G36641 N 0.736
GSMUA_Achr2G18160_001 Musa acuminata GSMUA_Achr2G18160_001 N 0.736
GSMUA_Achr4G19110_001 Musa acuminata GSMUA_Achr4G19110_001 N 0.736
GSMUA_Achr5G13970_001 Musa acuminata GSMUA_Achr5G13970_001 N 0.736
MTR_8g066820 Medicago truncatula MTR_8g066820 N 0.736
PRUPE_ppa011266mg Prunus persica PRUPE_ppa011266mg N 0.736
TCM_015701 Theobroma cacao TCM_015701 N 0.736
e_gw1.1.253.1 Physcomitrella patens e_gw1.1.253.1 N 0.736
e_gw1.6.367.1 Physcomitrella patens e_gw1.6.367.1 N 0.736
mgf023930m Mimulus guttatus mgf023930m N 0.736
Aquca_005_00468 Aquilegia coerulea Aquca_005_00468 N 0.736
gene02186-v1.0-hybrid Fragaria vesca gene02186-v1.0-hybrid N 0.736
Lus10027735.g Linum usitatissimum Lus10027735.g N 0.736
Lus10035554.g Linum usitatissimum Lus10035554.g N 0.736
MDP0000553473 Malus domestica MDP0000553473 N 0.736
MDP0000570901 Malus domestica MDP0000570901 N 0.736
GLYMA01G11390 Glycine max GLYMA01G11390 N 0.722
GLYMA10G07240 Glycine max GLYMA10G07240 N 0.722
GLYMA13G21140 Glycine max GLYMA13G21140 N 0.722
GLYMA19G37220 Glycine max GLYMA19G37220 N 0.722
GSMUA_Achr8G14740_001 Musa acuminata GSMUA_Achr8G14740_001 N 0.722
MTR_4g078170 Medicago truncatula MTR_4g078170 N 0.722
MTR_7g102790 Medicago truncatula MTR_7g102790 N 0.722
PGSC0003DMG400008598 Solanum tuberosum PGSC0003DMG400008598 N 0.722
VIT_16s0039g01560 Vitis vinifera VIT_16s0039g01560 N 0.722
Pm023220 Prunus mume Pm023220 N 0.722
Cucsa.318510 Cucumis sativus Cucsa.318510 N 0.722
evm.TU.supercontig_43.104 Carica papaya evm.TU.supercontig_43.104 N 0.722
Gorai.006G159900 Gossypium raimondii Gorai.006G159900 N 0.722
Gorai.008G226100 Gossypium raimondii Gorai.008G226100 N 0.722
Lus10000482.g Linum usitatissimum Lus10000482.g N 0.722
orange1.1g026096m.g Citrus sinensis orange1.1g026096m.g N 0.722
PK29286.1 Cannabis sativa PK29286.1 N 0.722
SapurV1A.0360s0060 Salix purpurea SapurV1A.0360s0060 N 0.716
Solyc10g085800.1 Solanum lycopersicum Solyc10g085800.1 N 0.712
GLYMA01G44430 Glycine max GLYMA01G44430 N 0.708
GLYMA03G34530 Glycine max GLYMA03G34530 N 0.708
GLYMA11G01100 Glycine max GLYMA11G01100 N 0.708
MTR_5g007230 Medicago truncatula MTR_5g007230 N 0.708
POPTR_0019s07790 Populus trichocarpa POPTR_0019s07790 N 0.708
TCM_025548 Theobroma cacao TCM_025548 N 0.708
Ca_00735 Cicer arietinum Ca_00735 N 0.708
Ca_11837 Cicer arietinum Ca_11837 N 0.708
30073.m002298 Ricinus communis 30073.m002298 N 0.708
cassava13685.valid.m1 Manihot esculenta cassava13685.valid.m1 N 0.708
cassava22380.valid.m1 Manihot esculenta cassava22380.valid.m1 N 0.708
Cucsa.378840 Cucumis sativus Cucsa.378840 N 0.708
Ciclev10032089m.g Citrus clementina Ciclev10032089m.g N 0.708
Eucgr.A01594 Eucalyptus grandis Eucgr.A01594 N 0.708
evm.TU.supercontig_5.128 Carica papaya evm.TU.supercontig_5.128 N 0.708
Gorai.003G056500 Gossypium raimondii Gorai.003G056500 N 0.708
Gorai.007G032400 Gossypium raimondii Gorai.007G032400 N 0.708
Gorai.013G184000 Gossypium raimondii Gorai.013G184000 N 0.708
GSMUA_AchrUn_randomG07560_001 Musa acuminata GSMUA_AchrUn_randomG07560_001 N 0.704
POPTR_0001s21990 Populus trichocarpa POPTR_0001s21990 N 0.703
POPTR_0009s00830 Populus trichocarpa POPTR_0009s00830 N 0.703
evm.TU.supercontig_30.61 Carica papaya evm.TU.supercontig_30.61 N 0.703
GRMZM2G408887 Zea mays GRMZM2G408887 N 0.700