pou5f3 (Tetraodon nigroviridis)
POU

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00157 (Pou) IPR000327 ENSTNIG00000003465 T316266_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
Pou2f1
M00803_2.00 		Mus musculus
NHATWWNHNN
NNDNWWATDN		 PBM
Weirauch et al.(2013)
pTH4325 		0.750 0.750
For this family, TFs with SR scores > 0.700 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
ENSTNIP00000006052 POU 252 323

Links

Other POU family TFs
Other Tetraodon nigroviridis TFs

23 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
BGIOSGA008763 Oryza indica BGIOSGA008763 N
BGIOSGA008764 Oryza indica BGIOSGA008764 N
BRADI3G50930 Brachypodium distachyon BRADI3G50930 N
F775_27777 Aegilops tauschii F775_27777 N
GRMZM2G037792 Zea mays GRMZM2G037792 N
GRMZM2G098800 Zea mays GRMZM2G098800 N
GRMZM2G110579 Zea mays GRMZM2G110579 N
GRMZM5G825321 Zea mays GRMZM5G825321 N
MLOC_43989 Hordeum vulgare MLOC_43989 N
OB02G34120 Oryza brachyantha OB02G34120 N
OB02G34130 Oryza brachyantha OB02G34130 N
OBART02G26880 Oryza barthii OBART02G26880 N
OBART02G26890 Oryza barthii OBART02G26890 N
OBART04G21150 Oryza barthii OBART04G21150 N
OGLUM02G27370 Oryza glumaepatula OGLUM02G27370 N
OGLUM02G27380 Oryza glumaepatula OGLUM02G27380 N
OGLUM04G21070 Oryza glumaepatula OGLUM04G21070 N
OLONG_010301 Oryza longistaminata OLONG_010301 N
OMERI04G17630 Oryza meridionalis OMERI04G17630 N
ONIVA02G29390 Oryza nivara ONIVA02G29390 N
ONIVA06G04040 Oryza nivara ONIVA06G04040 N
OPUNC02G24500 Oryza punctata OPUNC02G24500 N
OPUNC04G18860 Oryza punctata OPUNC04G18860 N
ORGLA02G0231500 Oryza glaberrima ORGLA02G0231500 N
ORGLA02G0231600 Oryza glaberrima ORGLA02G0231600 N
ORGLA04G0182200 Oryza glaberrima ORGLA04G0182200 N
ORUFI02G28320 Oryza rufipogon ORUFI02G28320 N
ORUFI02G28330 Oryza rufipogon ORUFI02G28330 N
ORUFI04G22740 Oryza rufipogon ORUFI04G22740 N
OS02G0662700 Oryza sativa OS02G0662700 N
OS02G0663100 Oryza sativa OS02G0663100 N
OS04G0555000 Oryza sativa OS04G0555000 N
Pavir.Aa00854 Panicum virgatum Pavir.Aa00854 N
Pavir.Ga01057 Panicum virgatum Pavir.Ga01057 N
Sb04g032570 Sorghum bicolor Sb04g032570 N
Sb06g024820 Sorghum bicolor Sb06g024820 N
Si016508m.g Setaria italica Si016508m.g N
Traes_6AL_4084532FC1 Triticum aestivum Traes_6AL_4084532FC1 N
Traes_6BL_972224088 Triticum aestivum Traes_6BL_972224088 N