Afo_R002575 (Aptenodytes forsteri)
Rel

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00554 (RHD_DNA_bind) IPR011539 Afo_R002575 T317723_2.00 GigaDB (2015-Oct-22)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
Nfkb2
M09356_2.00 		Mus musculus
GGGRHTTYCCC
GGGRAADYCCC		 Misc
Kulakovskiy et al.(2013)
NFKB2_MOUSE.H11MO.0.C 		0.805 0.805
NFKB2
M03446_2.00 		Homo sapiens
NGGGGAWTCCCCB
VGGGGAWTCCCCN		 SELEX
Jolma et al.(2013)
NFKB2_1 		0.793 0.793
NFKB2
M05699_2.00 		Homo sapiens
HGGKRNWTCCCCN
NGGGGAWNYMCCD		 SELEX
Yin et al.(2017)
NFKB2_eDBD_HT-SELEX 		0.793 0.793
NFKB2
M09344_2.00 		Homo sapiens
GGGRHTTYCCC
GGGRAADYCCC		 Misc
Kulakovskiy et al.(2013)
NFKB2_HUMAN.H11MO.0.B 		0.793 0.793
NFKB2
M05700_2.00 		Homo sapiens
HGGKRNWTYCCCN
NGGGRAWNYMCCD		 SELEX
Yin et al.(2017)
NFKB2_eDBD_Methyl-HT-SELEX 		0.793 0.793
For this family, TFs with SR scores > 0.700 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Afo_R002575 Rel 30 210

Links

Other Rel family TFs
Other Aptenodytes forsteri TFs

54 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
Aan_R015482 Calypte anna Aan_R015482 N
Afo_R013969 Aptenodytes forsteri Afo_R013969 N
Alligator_sinensis_CCG011037.1 Alligator sinensis Alligator_sinensis_CCG011037.1 N
Brh_R002265 Buceros rhinoceros Brh_R002265 N
ZBTB8A Anolis carolinensis ENSACAG00000004819 N
ENSAMEG00000007556 Ailuropoda melanoleuca ENSAMEG00000007556 N
ZBTB8A Bos taurus ENSBTAG00000018199 N
ENSBTAP00000024222-D1 Bos grunniens ENSBTAP00000024222-D1 N
ZBTB8A Canis familiaris ENSCAFG00000023779 N
ZBTB8A Choloepus hoffmanni ENSCHOG00000004051 N
ZBTB8A Callithrix jacchus ENSCJAG00000001003 N
ENSCPOG00000020832 Cavia porcellus ENSCPOG00000020832 N
ENSCSAG00000001058 Chlorocebus sabaeus ENSCSAG00000001058 N
ZBTB8A Dasypus novemcinctus ENSDNOG00000032935 N
Zbtb8a Dipodomys ordii ENSDORG00000007027 N
ZBTB8A Equus caballus ENSECAG00000023392 N
ENSFALG00000000603 Ficedula albicollis ENSFALG00000000603 N
ZBTB8A Felis catus ENSFCAG00000027580 N
ZBTB8A Homo sapiens ENSG00000160062 N
ENSGALG00000003420 Gallus gallus ENSGALG00000003420 N
ZBTB8A Loxodonta africana ENSLAFG00000031979 N
ENSMEUG00000013710 Macropus eugenii ENSMEUG00000013710 N
ZBTB8A Meleagris gallopavo ENSMGAG00000004949 N
ZBTB8A Myotis lucifugus ENSMLUG00000023002 N
ZBTB8A Monodelphis domestica ENSMODG00000017424 N
ENSMPUG00000015223 Mustela putorius furo ENSMPUG00000015223 N
Zbtb8a Mus musculus ENSMUSG00000028807 N
ENSNLEG00000002769 Nomascus leucogenys ENSNLEG00000002769 N
ZBTB8A Ornithorhynchus anatinus ENSOANG00000001191 N
ENSOARG00000020930 Ovis aries ENSOARG00000020930 N
ZBTB8A Oryctolagus cuniculus ENSOCUG00000021621 N
ZBTB8A Otolemur garnettii ENSOGAG00000028328 N
ZBTB8A Ochotona princeps ENSOPRG00000018275 N
ENSPANG00000019096 Papio anubis ENSPANG00000019096 N
ZBTB8A Procavia capensis ENSPCAG00000013857 N
ENSPPYG00000001590 Pongo abelii ENSPPYG00000001590 N
ENSPSIG00000008472 Pelodiscus sinensis ENSPSIG00000008472 N
ZBTB8A Pan troglodytes ENSPTRG00000034505 N
ZBTB8A Pteropus vampyrus ENSPVAG00000010978 N
Zbtb8a Rattus norvegicus ENSRNOG00000008300 N
ENSSHAG00000010423 Sarcophilus harrisii ENSSHAG00000010423 N
ZBTB8A Sus scrofa ENSSSCG00000021457 N
ENSSTOG00000024103 Ictidomys tridecemlineatus ENSSTOG00000024103 N
ZBTB8A Taeniopygia guttata ENSTGUG00000001373 N
ENSTSYG00000009437 Tarsius syrichta ENSTSYG00000009437 N
ZBTB8A Tursiops truncatus ENSTTRG00000014967 N
ZBTB8A Vicugna pacos ENSVPAG00000011873 N
Gfo_R011646 Geospiza fortis Gfo_R011646 N
Myotis_brandtii_ZBTB8A_10012393 Myotis brandtii Myotis_brandtii_ZBTB8A_10012393 N
Ogr05994 Ophisaurus gracilis Ogr05994 N
Pvit_17720 Pogona vitticeps Pvit_17720 N
Tal_R009236 Tyto alba Tal_R009236 N