CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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MDOA004895
(
Musca domestica
)
Rel
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00554 (RHD_DNA_bind)
IPR011539
MDOA004895
T317932_2.00
Vectorbase (2015-Oct-22)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
Rel
M03957_2.00
Drosophila melanogaster
NGGGGRTTCCCCB
VGGGGAAYCCCCN
SELEX
Nitta et al.(2015)
Rel_1
0.731
0.731
Rel
M03958_2.00
Drosophila melanogaster
GGGGGTTCCCCB
VGGGGAACCCCC
SELEX
Nitta et al.(2015)
Rel_2
0.731
0.731
For this family, TFs with SR scores >
0.700
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
MDOA004895-PA
Rel
160
343
LRILEQPVEKFRFRYKSEMHGTHGSLNGANSQRTTKSFPEIELCDYKEPAIIRCSLFQANRDSPHSHQLVVRKDDHDICDPHELKVSQQTGFFVEFKNMGIIHTAKKFIVEELLKKKRKRLQFELGRDNLTTKEQQELSIQTEKEAKDMNLNQVRLCFEAFGYDQNNKCIPIAAPVYSNTINNR
Links
Other
Rel
family TFs
Other
Musca domestica
TFs
12 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
ZNF607
Callithrix jacchus
ENSCJAG00000013430
I
ZNF540
Homo sapiens
ENSG00000171817
D
ENSNLEG00000016978
Nomascus leucogenys
ENSNLEG00000016978
I
ENSPPYG00000009917
Pongo abelii
ENSPPYG00000009917
I
ZNF540
Pan troglodytes
ENSPTRG00000010912
I