ZNF540 (Pan troglodytes)
C2H2 ZF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00096 (zf-C2H2) IPR007087 ENSPTRG00000010912 T107979_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
ZNF540
M07634_2.00 		Homo sapiens
RAACGTCYACK
MGTRGACGTTY		 ChIP-seq+ChIP-exo
Barazandeh et al.(2018)
ZNF540.MEME.OriginalMapping 		0.827 0.997
For this family, TFs with SR scores > 0.755 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
ENSPTRP00000018701 C2H2 ZF 187 209
ENSPTRP00000018701 C2H2 ZF 215 237
ENSPTRP00000018701 C2H2 ZF 243 265
ENSPTRP00000018701 C2H2 ZF 271 293
ENSPTRP00000018701 C2H2 ZF 299 321
ENSPTRP00000018701 C2H2 ZF 327 349
ENSPTRP00000018701 C2H2 ZF 355 377
ENSPTRP00000018701 C2H2 ZF 383 405
ENSPTRP00000018701 C2H2 ZF 411 433
ENSPTRP00000018701 C2H2 ZF 439 461
ENSPTRP00000018701 C2H2 ZF 467 489
ENSPTRP00000018701 C2H2 ZF 495 517
ENSPTRP00000018701 C2H2 ZF 523 545
ENSPTRP00000018701 C2H2 ZF 551 573
ENSPTRP00000018701 C2H2 ZF 579 601
ENSPTRP00000018701 C2H2 ZF 607 629
ENSPTRP00000018701 C2H2 ZF 635 657

Links

Other C2H2 ZF family TFs
Other Pan troglodytes TFs

4 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
ZNF540 Homo sapiens ENSG00000171817 D 0.827
ZNF607 Callithrix jacchus ENSCJAG00000013430 I 0.815
ENSPPYG00000009917 Pongo abelii ENSPPYG00000009917 I 0.812
ENSNLEG00000016978 Nomascus leucogenys ENSNLEG00000016978 I 0.799