CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
Home
Tools
View cart
Bulk downloads
Database stats
Contact us
Help
Update Log
FAQ
Links
How to cite
L889_g8852
(
Steinernema feltiae
)
Rel
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00554 (RHD_DNA_bind)
IPR011539
L889_g8852
T317948_2.00
WormBase:ParaSite (2015-Oct-22)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
L889_g8852.t1
Rel
149
308
LTVIRQPEQQHRARYLSEGSRGAIKDRSGTSHCTIQLSGFYRPTRIEMFAGTGAGAVASHPLYRLIAVSGKAANTTPCRAIVSSDGTHCLEVVLRPENNMTAVLDCMGILKICTYDVKQRRVSKSASNCSVRLTFRAYIPDANGGADTVIQTESEPIRCM
L889_g8852.t2
Rel
39
198
LTVIRQPEQQHRARYLSEGSRGAIKDRSGTSHCTIQLSGFYRPTRIEMFAGTGAGAVASHPLYRLIAVSGKAANTTPCRAIVSSDGTHCLEVVLRPENNMTAVLDCMGILKICTYDVKQRRVSKSASNCSVRLTFRAYIPDANGGADTVIQTESEPIRCM
L889_g8852.t3
Rel
274
433
LTVIRQPEQQHRARYLSEGSRGAIKDRSGTSHCTIQLSGFYRPTRIEMFAGTGAGAVASHPLYRLIAVSGKAANTTPCRAIVSSDGTHCLEVVLRPENNMTAVLDCMGILKICTYDVKQRRVSKSASNCSVRLTFRAYIPDANGGADTVIQTESEPIRCM
Links
Other
Rel
family TFs
Other
Steinernema feltiae
TFs
5 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
A1O3_00136
Capronia epimyces
A1O3_00136
N
A1O7_05077
Cladophialophora yegresii
A1O7_05077
N
A1O9_09096
Exophiala aquamarina
A1O9_09096
N
HMPREF1120_03446
Exophiala dermatitidis
HMPREF1120_03446
N
PV04_04135
Capronia semiimmersa
PV04_04135
N
PV06_01690
Exophiala oligosperma
PV06_01690
N
PV07_04915
Cladophialophora immunda
PV07_04915
N
PV08_02436
Exophiala spinifera
PV08_02436
N
PV10_04361
Exophiala mesophila
PV10_04361
N
Z519_06633
Cladophialophora bantiana
Z519_06633
N