CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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L889_g8852
(
Steinernema feltiae
)
Rel
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00554 (RHD_DNA_bind)
IPR011539
L889_g8852
T317948_2.00
WormBase:ParaSite (2015-Oct-22)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
L889_g8852.t1
Rel
149
308
LTVIRQPEQQHRARYLSEGSRGAIKDRSGTSHCTIQLSGFYRPTRIEMFAGTGAGAVASHPLYRLIAVSGKAANTTPCRAIVSSDGTHCLEVVLRPENNMTAVLDCMGILKICTYDVKQRRVSKSASNCSVRLTFRAYIPDANGGADTVIQTESEPIRCM
L889_g8852.t2
Rel
39
198
LTVIRQPEQQHRARYLSEGSRGAIKDRSGTSHCTIQLSGFYRPTRIEMFAGTGAGAVASHPLYRLIAVSGKAANTTPCRAIVSSDGTHCLEVVLRPENNMTAVLDCMGILKICTYDVKQRRVSKSASNCSVRLTFRAYIPDANGGADTVIQTESEPIRCM
L889_g8852.t3
Rel
274
433
LTVIRQPEQQHRARYLSEGSRGAIKDRSGTSHCTIQLSGFYRPTRIEMFAGTGAGAVASHPLYRLIAVSGKAANTTPCRAIVSSDGTHCLEVVLRPENNMTAVLDCMGILKICTYDVKQRRVSKSASNCSVRLTFRAYIPDANGGADTVIQTESEPIRCM
Links
Other
Rel
family TFs
Other
Steinernema feltiae
TFs
5 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
L898_g32245
Steinernema monticolum
L898_g32245
N
0.923
L893_g6429
Steinernema glaseri
L893_g6429
N
0.761
L892_g12848
Steinernema scapterisci
L892_g12848
N
0.743
L596_g6335
Steinernema carpocapsae
L596_g6335
N
0.715