CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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Ocbimv22031898m.g
(
Octopus bimaculoides
)
RFX
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF02257 (RFX_DNA_binding)
IPR003150
Ocbimv22031898m.g
T319052_2.00
JGI:Metazome (2015-Oct-22)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Ocbimv22031896m.p
RFX
402
482
IETTCNWLRANLELRDGCYMSHLSLYTDYLSFCKKFSLPNPLNSSVLHTCVKAVFPNVEEKIIERKDGNKDIQFSGFSKRS
Ocbimv22031897m.p
RFX
402
482
IETTCNWLRANLELRDGCYMSHLSLYTDYLSFCKKFSLPNPLNSSVLHTCVKAVFPNVEEKIIERKDGNKDIQFSGFSKRS
Ocbimv22031898m.p
RFX
402
482
IETTCNWLRANLELRDGCYMSHLSLYTDYLSFCKKFSLPNPLNSSVLHTCVKAVFPNVEEKIIERKDGNKDIQFSGFSKRS
Ocbimv22031899m.p
RFX
402
482
IETTCNWLRANLELRDGCYMSHLSLYTDYLSFCKKFSLPNPLNSSVLHTCVKAVFPNVEEKIIERKDGNKDIQFSGFSKRS
Links
Other
RFX
family TFs
Other
Octopus bimaculoides
TFs
40 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
ACEP25962
Atta cephalotes
ACEP25962
N
0.651
Alligator_sinensis_CCG004973.1
Alligator sinensis
Alligator_sinensis_CCG004973.1
N
0.657
Cflo_11031--XP_001120115.1_APIME
Camponotus floridanus
Cflo_11031--XP_001120115.1_APIME
N
0.651
Cmyd_10012613
Chelonia mydas
Cmyd_10012613
N
0.657
ARID2
Bos taurus
ENSBTAG00000011087
N
0.656
ARID2
Canis familiaris
ENSCAFG00000009335
N
0.656
ENSCSAG00000006749
Chlorocebus sabaeus
ENSCSAG00000006749
N
0.656
ARID2
Dasypus novemcinctus
ENSDNOG00000014939
N
0.656
ARID2
Equus caballus
ENSECAG00000019032
N
0.656
ARID2
Felis catus
ENSFCAG00000012831
N
0.656
ARID2
Homo sapiens
ENSG00000189079
N
0.656
ENSLACG00000005013
Latimeria chalumnae
ENSLACG00000005013
N
0.657
ARID2
Loxodonta africana
ENSLAFG00000004415
N
0.656
ARID2
Microcebus murinus
ENSMICG00000001487
N
0.656
ARID2
Myotis lucifugus
ENSMLUG00000006908
N
0.657
ARID2
Macaca mulatta
ENSMMUG00000015962
N
0.656
ENSMMUP00000020998
Macaca fascicularis
ENSMMUP00000020998
N
0.656
ARID2
Monodelphis domestica
ENSMODG00000018527
N
0.656
ENSOANG00000010834
Ornithorhynchus anatinus
ENSOANG00000010834
N
0.655
ARID2
Oryctolagus cuniculus
ENSOCUG00000013306
N
0.656
ARID2
Otolemur garnettii
ENSOGAG00000024418
N
0.656
ENSP00000335044-D1
Bos grunniens
ENSP00000335044-D1
N
0.656
ENSPANG00000015334
Papio anubis
ENSPANG00000015334
N
0.656
ARID2
Pteropus vampyrus
ENSPVAG00000009834
N
0.656
ARID2
Sorex araneus
ENSSARG00000007415
N
0.651
ENSSSCG00000030685
Sus scrofa
ENSSSCG00000030685
N
0.656
ARID2
Vicugna pacos
ENSVPAG00000004779
N
0.656
ENSXMAG00000006636
Xiphophorus maculatus
ENSXMAG00000006636
N
0.651
fgenesh2_pg.scaffold_503000011
Branchiostoma floridae
fgenesh2_pg.scaffold_503000011
I
0.674
Hsal_11764--XP_001120115.1_APIME
Harpegnathos saltator
Hsal_11764--XP_001120115.1_APIME
N
0.652
ISCW014107
Ixodes scapularis
ISCW014107
N
0.651
LotgiG113173
Lottia gigantea
LotgiG113173
I
0.652
Myotis_brandtii_ARID2_10029493
Myotis brandtii
Myotis_brandtii_ARID2_10029493
N
0.657
NEMVEDRAFT_v1g122918
Nematostella vectensis
NEMVEDRAFT_v1g122918
I
0.654
O9G_004738
Rozella allomycis
O9G_004738
I
0.653
Sakowv30024145m.g
Saccoglossus kowalevskii
Sakowv30024145m.g
N
0.669
SPU_026159
Strongylocentrotus purpuratus
SPU_026159
N
0.671
Tal_R007164
Tyto alba
Tal_R007164
N
0.655
TriadG51266
Trichoplax adhaerens
TriadG51266
I
0.655