ACEP16391 (Atta cephalotes)
Runt

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00853 (Runt) IPR013524 ACEP16391 T319287_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
lz
M03964_2.00 		Drosophila melanogaster
HRACCGCAAHM
KDTTGCGGTYD		 SELEX
Nitta et al.(2015)
lz_1 		0.735 0.735
lz
M03965_2.00 		Drosophila melanogaster
HVACCRCARWAACCRCAV
BTGYGGTTWYTGYGGTBD		 SELEX
Nitta et al.(2015)
lz_2 		0.735 0.735
lz
M03966_2.00 		Drosophila melanogaster
WRACCRCAWTAACCRCAA
TTGYGGTTAWTGYGGTYW		 SELEX
Nitta et al.(2015)
lz_3 		0.735 0.735
lz
M03967_2.00 		Drosophila melanogaster
HRACCGCAAAACCRCAR
YTGYGGTTTTGCGGTYD		 SELEX
Nitta et al.(2015)
lz_4 		0.735 0.735
Runx1
M08163_2.00 		Mus musculus
HRRCCACARVN
NBYTGTGGYYD		 ChIP-seq
Mathelier et al.(2014)
MA0002.2 		0.735 0.735
RUNX1
M09371_2.00 		Homo sapiens
NWAACCACARV
BYTGTGGTTWN		 Misc
Kulakovskiy et al.(2013)
RUNX1_HUMAN.H11MO.0.A 		0.735 0.735
Runx1
M09372_2.00 		Mus musculus
VWRACCACARVV
BBYTGTGGTYWB		 Misc
Kulakovskiy et al.(2013)
RUNX1_MOUSE.H11MO.0.A 		0.735 0.735
RUNX1
M09632_2.00 		Homo sapiens
HAACCACADV
BHTGTGGTTD		 Misc
Heinz et al.(2010)
Jurkat-RUNX1_GSE29180 		0.735 0.735
RUNX1
M09631_2.00 		Homo sapiens
VCCACWTCCTBY
RVAGGAWGTGGB		 Misc
Heinz et al.(2010)
Jurkat-RUNX1_GSE17954 		0.735 0.735
Runx1
M09633_2.00 		Mus musculus
NWAACCACAR
YTGTGGTTWN		 Misc
Heinz et al.(2010)
HPC7-Runx1_GSE22178 		0.735 0.735
RUNX1
M11258_2.00 		Homo sapiens
ACCRCA
TGYGGT		 Transfac
Matys et al.(2006)
V$AML1_01 		0.735 0.735
RUNX1
M11259_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$AML1_Q4_01 		0.735 0.735
RUNX1
M11260_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$AML1_Q4_02 		0.735 0.735
RUNX1
M11261_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$AML1_Q4 		0.735 0.735
RUNX1
M11262_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$AML1_Q5 		0.735 0.735
RUNX1
M11263_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$AML1_Q6 		0.735 0.735
Runx2
M01307_2.00 		Mus musculus
NHDACCRCAN
NTGYGGTHDN		 PBM
Lambert et al.(2019)
pTH9764 		0.724 0.724
RUNX2
M03468_2.00 		Homo sapiens
HRACCGCAAACCRCRD
HYGYGGTTTGCGGTYD		 SELEX
Jolma et al.(2013)
RUNX2_1 		0.724 0.724
RUNX2
M03469_2.00 		Homo sapiens
HRACCRCADWWACCRCAD
HTGYGGTWWHTGYGGTYD		 SELEX
Jolma et al.(2013)
RUNX2_2 		0.724 0.724
RUNX2
M03470_2.00 		Homo sapiens
WAACCRCAR
YTGYGGTTW		 SELEX
Jolma et al.(2013)
RUNX2_3 		0.724 0.724
RUNX3
M03464_2.00 		Homo sapiens
HRACCGCAAACCRCAN
NTGYGGTTTGCGGTYD		 SELEX
Jolma et al.(2013)
RUNX3_1 		0.724 0.724
RUNX3
M03465_2.00 		Homo sapiens
WAACCRCARN
NYTGYGGTTW		 SELEX
Jolma et al.(2013)
RUNX3_2 		0.724 0.724
RUNX3
M03466_2.00 		Homo sapiens
HDACCRCADWAACCRCRN
NYGYGGTTWHTGYGGTHD		 SELEX
Jolma et al.(2013)
RUNX3_3 		0.724 0.724
RUNX3
M03467_2.00 		Homo sapiens
HRACCRCAAH
DTTGYGGTYD		 SELEX
Jolma et al.(2013)
RUNX3_4 		0.724 0.724
RUNX3
M02751_2.00 		Homo sapiens
WACCRCAM
KTGYGGTW		 SELEX
Jolma et al.(2010)
RUNX3_monomer 		0.724 0.724
RUNX2
M05733_2.00 		Homo sapiens
NHRACCRCADWAACCRCAVN
NBTGYGGTTWHTGYGGTYDN		 SELEX
Yin et al.(2017)
RUNX2_eDBD_HT-SELEX 		0.724 0.724
RUNX3
M05731_2.00 		Homo sapiens
YWAACCGCAAAAACCGCARV
BYTGCGGTTTTTGCGGTTWR		 SELEX
Yin et al.(2017)
RUNX3_FL_HT-SELEX 		0.724 0.724
RUNX2
M09370_2.00 		Homo sapiens
MMHAACCACAVVMH
DKBBTGTGGTTDKK		 Misc
Kulakovskiy et al.(2013)
RUNX2_HUMAN.H11MO.0.A 		0.724 0.724
RUNX3
M09369_2.00 		Homo sapiens
HAACCACARN
NYTGTGGTTD		 Misc
Kulakovskiy et al.(2013)
RUNX3_HUMAN.H11MO.0.A 		0.724 0.724
Runx2
M09373_2.00 		Mus musculus
VWRACCACARVV
BBYTGTGGTYWB		 Misc
Kulakovskiy et al.(2013)
RUNX2_MOUSE.H11MO.0.A 		0.724 0.724
Runx3
M09374_2.00 		Mus musculus
NHRACCACARVN
NBYTGTGGTYDN		 Misc
Kulakovskiy et al.(2013)
RUNX3_MOUSE.H11MO.0.A 		0.724 0.724
RUNX2
M09630_2.00 		Homo sapiens
NHVACCACANNN
NNNTGTGGTBDN		 Misc
Heinz et al.(2010)
PCa-RUNX2_GSE33889 		0.724 0.724
RUNX3
M11252_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$AML2_Q3_01 		0.724 0.724
RUNX3
M11253_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$AML2_Q3 		0.724 0.724
RUNX3
M11254_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$AML2_Q4 		0.724 0.724
RUNX2
M11255_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$AML3_Q3 		0.724 0.724
RUNX2
M11256_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$AML3_Q6 		0.724 0.724
RUNX2
M11257_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$OSF2_Q6 		0.724 0.724
RUNX2
M05734_2.00 		Homo sapiens
NWAACCACRAAAACCACRRN
NYYGTGGTTTTYGTGGTTWN		 SELEX
Yin et al.(2017)
RUNX2_eDBD_Methyl-HT-SELEX 		0.724 0.724
RUNX3
M05732_2.00 		Homo sapiens
HWAACCACRAAAACCACRARN
NYTYGTGGTTTTYGTGGTTWD		 SELEX
Yin et al.(2017)
RUNX3_FL_Methyl-HT-SELEX 		0.724 0.724
For this family, TFs with SR scores > 0.700 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
ACEP16391-PA Runt 87 184

Links

Other Runt family TFs
Other Atta cephalotes TFs

69 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
Aan_R015364 Calypte anna Aan_R015364 I
Afo_R001760 Aptenodytes forsteri Afo_R001760 I
Alligator_sinensis_CCG020380.1 Alligator sinensis Alligator_sinensis_CCG020380.1 I
Brh_R011720 Buceros rhinoceros Brh_R011720 I
ENSACAG00000001604 Anolis carolinensis ENSACAG00000001604 I
ENSAMEG00000019874 Ailuropoda melanoleuca ENSAMEG00000019874 I
ENSAPLG00000001852 Anas platyrhynchos ENSAPLG00000001852 I
MSGN1 Bos taurus ENSBTAG00000039113 I
MSGN1 Canis familiaris ENSCAFG00000003750 I
MSGN1 Callithrix jacchus ENSCJAG00000032633 I
MSGN1 Cavia porcellus ENSCPOG00000003061 I
ENSCSAG00000000377 Chlorocebus sabaeus ENSCSAG00000000377 I
MSGN1 Dasypus novemcinctus ENSDNOG00000013441 I
Msgn1 Dipodomys ordii ENSDORG00000003509 I
MSGN1 Equus caballus ENSECAG00000002724 I
MSGN1 Erinaceus europaeus ENSEEUG00000015222 I
ENSFALG00000001820 Ficedula albicollis ENSFALG00000001820 I
MSGN1 Felis catus ENSFCAG00000013583 I
MSGN1 Homo sapiens ENSG00000151379 D
msgn1 Gasterosteus aculeatus ENSGACG00000008864 N
msgn1 Gasterosteus aculeatus ENSGACG00000008865 N
MSGN1 Gorilla gorilla ENSGGOG00000012168 I
MSGN1 Loxodonta africana ENSLAFG00000015319 I
ENSLOCG00000017878 Lepisosteus oculatus ENSLOCG00000017878 I
ENSMEUG00000006206 Macropus eugenii ENSMEUG00000006206 I
MSGN1 Meleagris gallopavo ENSMGAG00000016374 I
ENSMICG00000010842 Microcebus murinus ENSMICG00000010842 I
MSGN1 Myotis lucifugus ENSMLUG00000007599 I
MSGN1 Macaca mulatta ENSMMUG00000008141 I
MSGN1 Monodelphis domestica ENSMODG00000004056 I
ENSMPUG00000019484 Mustela putorius furo ENSMPUG00000019484 I
Msgn1 Mus musculus ENSMUSG00000047002 D
ENSNLEG00000018810 Nomascus leucogenys ENSNLEG00000018810 I
MSGN1 Ornithorhynchus anatinus ENSOANG00000002188 I
ENSOARG00000016765 Ovis aries ENSOARG00000016765 I
MSGN1 Oryctolagus cuniculus ENSOCUG00000000309 I
MSGN1 Otolemur garnettii ENSOGAG00000012569 I
ENSONIG00000013311 Oreochromis niloticus ENSONIG00000013311 N
msgn1 Oryzias latipes ENSORLG00000014828 N
ENSP00000281047 Macaca fascicularis ENSP00000281047 I
ENSP00000281047-D1 Bos grunniens ENSP00000281047-D1 I
ENSPANG00000004064 Papio anubis ENSPANG00000004064 I
MSGN1 Procavia capensis ENSPCAG00000015116 I
ENSPFOG00000020615 Poecilia formosa ENSPFOG00000020615 N
ENSPPYG00000012628 Pongo abelii ENSPPYG00000012628 I
MSGN1 Pan troglodytes ENSPTRG00000011679 I
MSGN1 Pteropus vampyrus ENSPVAG00000015666 I
Msgn1 Rattus norvegicus ENSRNOG00000028518 I
MSGN1 Sorex araneus ENSSARG00000007866 I
MSGN1 Sus scrofa ENSSSCG00000026538 I
ENSSTOG00000013981 Ictidomys tridecemlineatus ENSSTOG00000013981 I
MSGN1 Tupaia belangeri ENSTBEG00000001387 I
MSGN1 Taeniopygia guttata ENSTGUG00000013122 I
msgn1 Takifugu rubripes ENSTRUG00000008888 N
ENSTSYG00000003733 Tarsius syrichta ENSTSYG00000003733 I
MSGN1 Tursiops truncatus ENSTTRG00000015917 I
ENSXMAG00000020371 Xiphophorus maculatus ENSXMAG00000020371 N
Gfo_R015241 Geospiza fortis Gfo_R015241 I
Myotis_brandtii_MSGN1_10020188 Myotis brandtii Myotis_brandtii_MSGN1_10020188 I
Pvit_07087 Pogona vitticeps Pvit_07087 I
Tal_R008386 Tyto alba Tal_R008386 I
msgn1.S Xenopus laevis XB-GENE-6251945 N