DAPPUDRAFT_290554 (Daphnia pulex)
Runt

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00853 (Runt) IPR013524 DAPPUDRAFT_290554 T319322_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
lz
M03964_2.00 		Drosophila melanogaster
HRACCGCAAHM
KDTTGCGGTYD		 SELEX
Nitta et al.(2015)
lz_1 		0.708 0.708
lz
M03965_2.00 		Drosophila melanogaster
HVACCRCARWAACCRCAV
BTGYGGTTWYTGYGGTBD		 SELEX
Nitta et al.(2015)
lz_2 		0.708 0.708
lz
M03966_2.00 		Drosophila melanogaster
WRACCRCAWTAACCRCAA
TTGYGGTTAWTGYGGTYW		 SELEX
Nitta et al.(2015)
lz_3 		0.708 0.708
lz
M03967_2.00 		Drosophila melanogaster
HRACCGCAAAACCRCAR
YTGYGGTTTTGCGGTYD		 SELEX
Nitta et al.(2015)
lz_4 		0.708 0.708
For this family, TFs with SR scores > 0.700 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
EFX83870 Runt 22 151

Links

Other Runt family TFs
Other Daphnia pulex TFs

128 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
AAEL006160 Aedes aegypti AAEL006160 I 0.762
AAEL006167 Aedes aegypti AAEL006167 I 0.700
AAEL007040 Aedes aegypti AAEL007040 I 0.738
AALB007752 Anopheles albimanus AALB007752 I 0.725
AALB007753 Anopheles albimanus AALB007753 I 0.745
AALB007754 Anopheles albimanus AALB007754 I 0.708
AALB009220 Anopheles albimanus AALB009220 I 0.700
Aan_R007315 Calypte anna Aan_R007315 I 0.711
AARA011332 Anopheles arabiensis AARA011332 I 0.722
AARA011472 Anopheles arabiensis AARA011472 I 0.700
AATE002063 Anopheles atroparvus AATE002063 I 0.762
AATE017340 Anopheles atroparvus AATE017340 I 0.708
ACEP16400 Atta cephalotes ACEP16400 I 0.714
ACOM031089 Anopheles coluzzii ACOM031089 I 0.700
ACUA016618 Anopheles culicifacies ACUA016618 I 0.708
ACYPI001442 Acyrthosiphon pisum ACYPI001442 I 0.723
ACYPI007541 Acyrthosiphon pisum ACYPI007541 I 0.769
ADIR005600 Anopheles dirus ADIR005600 I 0.708
AEPI010884 Anopheles epiroticus AEPI010884 I 0.708
AFAF000166 Anopheles farauti AFAF000166 I 0.708
Afo_R004888 Aptenodytes forsteri Afo_R004888 I 0.711
AFUN010423 Anopheles funestus AFUN010423 I 0.708
AGAP001094 Anopheles gambiae AGAP001094 I 0.700
AMAM011616 Anopheles maculatus AMAM011616 I 0.800
AMAM016300 Anopheles maculatus AMAM016300 I 0.708
AMEC007551 Anopheles melas AMEC007551 I 0.700
AMEM004753 Anopheles merus AMEM004753 I 0.700
AMIN005759 Anopheles minimus AMIN005759 I 0.708
AQUA009970 Anopheles quadriannulatus AQUA009970 I 0.700
ASIS001308 Anopheles sinensis ASIS001308 I 0.708
ASIS002518 Anopheles sinensis ASIS002518 I 0.745
ASTEI07770 Anopheles stephensi ASTEI07770 I 0.708
ASTEI07771 Anopheles stephensi ASTEI07771 I 0.762
BGIBMGA008906 Bombyx mori BGIBMGA008906 I 0.723
Brh_R000794 Buceros rhinoceros Brh_R000794 I 0.736
Brh_R001637 Buceros rhinoceros Brh_R001637 I 0.711
Cflo_03909--XP_394016.2_APIME Camponotus floridanus Cflo_03909--XP_394016.2_APIME I 0.723
Cflo_03910--XP_001121886.1_APIME Camponotus floridanus Cflo_03910--XP_001121886.1_APIME I 0.715
Cflo_03911--XP_394014.2_APIME Camponotus floridanus Cflo_03911--XP_394014.2_APIME I 0.723
Cflo_03913--XP_394013.3_APIME Camponotus floridanus Cflo_03913--XP_394013.3_APIME I 0.715
CGI_10005366 Crassostrea gigas CGI_10005366 I 0.700
CLEC011122 Cimex lectularius CLEC011122 I 0.731
CPIJ016826 Culex quinquefasciatus CPIJ016826 I 0.747
CpipJ_CPIJ016826 Culex pipiens CpipJ_CPIJ016826 I 0.747
DAPPUDRAFT_290557 Daphnia pulex DAPPUDRAFT_290557 I 0.708
RUNX3 Anolis carolinensis ENSACAG00000017855 I 0.717
ENSAPLG00000011653 Anas platyrhynchos ENSAPLG00000011653 I 0.736
ENSFCAG00000029032 Felis catus ENSFCAG00000029032 I 0.738
RUNX2 Meleagris gallopavo ENSMGAG00000014267 I 0.736
ENSOANG00000031074 Ornithorhynchus anatinus ENSOANG00000031074 I 0.760
ENSPPYG00000001714 Pongo abelii ENSPPYG00000001714 I 0.700
ENSPSIG00000014293 Pelodiscus sinensis ENSPSIG00000014293 I 0.728
lz Drosophila melanogaster FBgn0002576 D 0.708
GA13742 Drosophila pseudoobscura FBgn0073778 I 0.715
RunxA Drosophila melanogaster FBgn0083981 I 0.738
GF15967 Drosophila ananassae FBgn0092990 I 0.715
GF15983 Drosophila ananassae FBgn0093006 I 0.738
GG17578 Drosophila erecta FBgn0109803 I 0.738
GG18309 Drosophila erecta FBgn0110525 I 0.708
GG19691 Drosophila erecta FBgn0111893 I 0.715
GH17737 Drosophila grimshawi FBgn0125207 I 0.715
GH17774 Drosophila grimshawi FBgn0125244 I 0.738
GI14398 Drosophila mojavensis FBgn0137150 I 0.700
GI15119 Drosophila mojavensis FBgn0137869 I 0.738
GI15484 Drosophila mojavensis FBgn0138233 I 0.701
GL15800 Drosophila persimilis FBgn0153404 I 0.715
GL15927 Drosophila persimilis FBgn0153531 I 0.738
GL16499 Drosophila persimilis FBgn0154103 I 0.715
GM22478 Drosophila sechellia FBgn0177348 I 0.708
GM22662 Drosophila sechellia FBgn0177532 I 0.738
GM23044 Drosophila sechellia FBgn0177912 I 0.715
GD17495 Drosophila simulans FBgn0189047 I 0.715
GJ18742 Drosophila virilis FBgn0205894 I 0.700
GJ18917 Drosophila virilis FBgn0206063 I 0.738
GJ19245 Drosophila virilis FBgn0206390 I 0.715
GK19810 Drosophila willistoni FBgn0221808 I 0.715
GK20052 Drosophila willistoni FBgn0222049 I 0.738
GK25373 Drosophila willistoni FBgn0227332 I 0.700
GE15340 Drosophila yakuba FBgn0232921 I 0.738
GE17788 Drosophila yakuba FBgn0235232 I 0.708
GE17890 Drosophila yakuba FBgn0235328 I 0.715
GA22609 Drosophila pseudoobscura FBgn0244012 I 0.715
GA25684 Drosophila pseudoobscura FBgn0247061 I 0.738
RunxB Drosophila melanogaster FBgn0259162 I 0.715
GB52718 Apis mellifera GB52718 I 0.715
GB52719 Apis mellifera GB52719 I 0.723
GB52721 Apis mellifera GB52721 I 0.715
GB52761 Apis mellifera GB52761 I 0.731
HMEL009843 Heliconius melpomene HMEL009843 I 0.705
Hsal_04635--XP_394013.3_APIME Harpegnathos saltator Hsal_04635--XP_394013.3_APIME I 0.700
Hsal_12319--XP_394016.2_APIME Harpegnathos saltator Hsal_12319--XP_394016.2_APIME I 0.723
Hsal_12321--XP_001121886.1_APIME Harpegnathos saltator Hsal_12321--XP_001121886.1_APIME I 0.708
Hsal_12322--XP_394014.2_APIME Harpegnathos saltator Hsal_12322--XP_394014.2_APIME I 0.731
KGM_21067 Danaus plexippus KGM_21067 I 0.700
KGM_21075 Danaus plexippus KGM_21075 I 0.738
L798_10922 Zootermopsis nevadensis L798_10922 I 0.746
LCUP002652 Lucilia cuprina LCUP002652 I 0.723
LCUP002653 Lucilia cuprina LCUP002653 N 0.707
LDEC006645 Leptinotarsa decemlineata LDEC006645 I 0.715
LDEC006650 Leptinotarsa decemlineata LDEC006650 I 0.710
LLOJ002049 Lutzomyia longipalpis LLOJ002049 I 0.727
MCINX005905 Melitaea cinxia MCINX005905 I 0.700
MDOA011942 Musca domestica MDOA011942 I 0.738
MDOA013149 Musca domestica MDOA013149 I 0.731
MESCA007078 Megaselia scalaris MESCA007078 I 0.757
NV10998 Nasonia vitripennis NV10998 I 0.700
NV11000 Nasonia vitripennis NV11000 I 0.746
NV17759 Nasonia vitripennis NV17759 I 0.738
NV17793 Nasonia vitripennis NV17793 I 0.723
PHUM333300 Pediculus humanus PHUM333300 I 0.738
PHUM333310 Pediculus humanus PHUM333310 I 0.715
PHUM333320 Pediculus humanus PHUM333320 I 0.754
PHUM333340 Pediculus humanus PHUM333340 I 0.738
PPAI006591 Phlebotomus papatasi PPAI006591 I 0.750
PPAI010986 Phlebotomus papatasi PPAI010986 I 0.723
RPRC000026 Rhodnius prolixus RPRC000026 I 0.734
RPRC005391 Rhodnius prolixus RPRC005391 I 0.769
SINV13317 Solenopsis invicta SINV13317 I 0.723
SINV13345 Solenopsis invicta SINV13345 I 0.707
SINV13363 Solenopsis invicta SINV13363 I 0.731
Tal_R011874 Tyto alba Tal_R011874 I 0.736
TC005566 Tribolium castaneum TC005566 I 0.769
TC005796 Tribolium castaneum TC005796 I 0.746
TC006536 Tribolium castaneum TC006536 I 0.754
TC006542 Tribolium castaneum TC006542 I 0.746
tetur01g02340 Tetranychus urticae tetur01g02340 I 0.700
runx3 Xenopus tropicalis XB-GENE-487784 I 0.700
YQE_12218 Dendroctonus ponderosae YQE_12218 I 0.738