run (Drosophila simulans)
Runt

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00853 (Runt) IPR013524 FBgn0016352 T319525_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
run
M06444_2.00 		Drosophila melanogaster
WAACCGCAR
YTGCGGTTW		 B1H
Zhu et al.(2011)
run_Bgb_NBT_FBgn0003300 		1.000 1.000
lz
M03964_2.00 		Drosophila melanogaster
HRACCGCAAHM
KDTTGCGGTYD		 SELEX
Nitta et al.(2015)
lz_1 		0.723 0.723
lz
M03965_2.00 		Drosophila melanogaster
HVACCRCARWAACCRCAV
BTGYGGTTWYTGYGGTBD		 SELEX
Nitta et al.(2015)
lz_2 		0.723 0.723
lz
M03966_2.00 		Drosophila melanogaster
WRACCRCAWTAACCRCAA
TTGYGGTTAWTGYGGTYW		 SELEX
Nitta et al.(2015)
lz_3 		0.723 0.723
lz
M03967_2.00 		Drosophila melanogaster
HRACCGCAAAACCRCAR
YTGYGGTTTTGCGGTYD		 SELEX
Nitta et al.(2015)
lz_4 		0.723 0.723
For this family, TFs with SR scores > 0.700 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
FBpp0215902 Runt 107 236

Links

Other Runt family TFs
Other Drosophila simulans TFs

180 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
ZFP28 Bos taurus ENSBTAG00000002055 N 0.000
ENSBTAP00000021794-D1 Bos grunniens ENSBTAP00000021794-D1 N 0.000
ZFP28 Canis familiaris ENSCAFG00000024289 I 0.000
ZFP28 Callithrix jacchus ENSCJAG00000020297 I 0.000
ENSCSAG00000001666 Chlorocebus sabaeus ENSCSAG00000001666 I 0.000
ZFP28 Dasypus novemcinctus ENSDNOG00000007010 I 0.000
ZFP28 Equus caballus ENSECAG00000013849 I 0.000
ZFP28 Homo sapiens ENSG00000196867 D 0.000
ZFP28 Gorilla gorilla ENSGGOG00000011352 I 0.000
ZFP28 Loxodonta africana ENSLAFG00000010041 I 0.000
ZFP28 Macaca mulatta ENSMMUG00000021673 I 0.000
ENSMPUG00000006646 Mustela putorius furo ENSMPUG00000006646 I 0.000
Zfp28 Mus musculus ENSMUSG00000062861 N 0.000
ENSNLEG00000010865 Nomascus leucogenys ENSNLEG00000010865 I 0.000
ZFP28 Otolemur garnettii ENSOGAG00000004896 I 0.000
ZFP28 Ochotona princeps ENSOPRG00000014306 I 0.000
ENSP00000301318 Macaca fascicularis ENSP00000301318 I 0.000
ENSPANG00000008416 Papio anubis ENSPANG00000008416 I 0.000
ENSPPYG00000010451 Pongo abelii ENSPPYG00000010451 I 0.000
ZFP28 Pan troglodytes ENSPTRG00000023421 I 0.000
Zfp28 Rattus norvegicus ENSRNOG00000042777 I 0.000
ZFP28 Sus scrofa ENSSSCG00000027774 I 0.000
ENSSTOG00000022134 Ictidomys tridecemlineatus ENSSTOG00000022134 I 0.000