Sjc_0130210 (Schistosoma japonicum)
Runt

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00853 (Runt) IPR013524 Sjc_0130210 T319699_2.00 Misc (2018-Jan-19)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
Smp_174320
M02457_2.00 		Schistosoma mansoni
NNAACCGCARN
NYTGCGGTTNN		 PBM
Weirauch et al.(2014)
pTH8368 		0.979 0.979
For this family, TFs with SR scores > 0.700 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
CPRT0000011922 Runt 11 104

Links

Other Runt family TFs
Other Schistosoma japonicum TFs

16 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
A_06411 Schistosoma haematobium A_06411 I 0.979
A_07565 Schistosoma haematobium A_07565 I 0.979
D915_03512 Fasciola hepatica D915_03512 I 0.788
EmuJ_000490800 Echinococcus multilocularis EmuJ_000490800 I 0.755
HDID_0000068701 Hymenolepis diminuta HDID_0000068701 I 0.745
HmN_000789900 Hymenolepis microstoma HmN_000789900 I 0.766
HNAJ_0001011401 Hymenolepis nana HNAJ_0001011401 I 0.766
MCOS_0000437401 Mesocestoides corti MCOS_0000437401 I 0.745
PXEA_0003260001 Protopolystoma xenopodis PXEA_0003260001 N 0.745
Smp_174320 Schistosoma mansoni Smp_174320 D 0.713
SMTD_0000935101 Schistosoma mattheei SMTD_0000935101 I 0.979
SPER_0000558501 Spirometra erinaceieuropaei SPER_0000558501 I 0.766
SROB_0000638901 Schistosoma rodhaini SROB_0000638901 I 0.979
T265_03056 Opisthorchis viverrini T265_03056 I 0.872
TRE_0000705801 Trichobilharzia regenti TRE_0000705801 I 0.968
TsM_000741200 Taenia solium TsM_000741200 I 0.745