T265_03056 (Opisthorchis viverrini)
Runt

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00853 (Runt) IPR013524 T265_03056 T319856_2.00 WormBase:ParaSite (2015-Oct-22)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
Smp_174320
M02457_2.00 		Schistosoma mansoni
NNAACCGCARN
NYTGCGGTTNN		 PBM
Weirauch et al.(2014)
pTH8368 		0.883 0.883
For this family, TFs with SR scores > 0.700 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
T265_03056 Runt 11 104

Links

Other Runt family TFs
Other Opisthorchis viverrini TFs

10 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
SROB_0000638901 Schistosoma rodhaini SROB_0000638901 I 0.894
SMTD_0000935101 Schistosoma mattheei SMTD_0000935101 I 0.883
Sjc_0130210 Schistosoma japonicum Sjc_0130210 I 0.872
TRE_0000705801 Trichobilharzia regenti TRE_0000705801 I 0.863
D915_03512 Fasciola hepatica D915_03512 I 0.798
PXEA_0003260001 Protopolystoma xenopodis PXEA_0003260001 N 0.734
csin105545 Clonorchis sinensis csin105545 I 0.715
HmN_000789900 Hymenolepis microstoma HmN_000789900 I 0.713
MCOS_0000437401 Mesocestoides corti MCOS_0000437401 I 0.713
EmuJ_000490800 Echinococcus multilocularis EmuJ_000490800 I 0.702