CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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D915_03512
(
Fasciola hepatica
)
Runt
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00853 (Runt)
IPR013524
D915_03512
T319798_2.00
WormBase:ParaSite (2015-Oct-22)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
Smp_174320
M02457_2.00
Schistosoma mansoni
NNAACCGCARN
NYTGCGGTTNN
PBM
Weirauch et al.(2014)
pTH8368
0.798
0.798
For this family, TFs with SR scores >
0.700
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
D915_03512
Runt
11
109
LKRALREHTMDLIQTSSPQLFCTPLPKHWRSNKSLPNQFRVVSLITIPDGTRVSVTAGNEDRPFAELKNPITVMHGNEARFSDLRFLGRSGRGESMLFA
Links
Other
Runt
family TFs
Other
Fasciola hepatica
TFs
7 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
A_06411
Schistosoma haematobium
A_06411
I
0.798
A_07565
Schistosoma haematobium
A_07565
I
0.798
Sjc_0130210
Schistosoma japonicum
Sjc_0130210
I
0.788
SMTD_0000935101
Schistosoma mattheei
SMTD_0000935101
I
0.830
SROB_0000638901
Schistosoma rodhaini
SROB_0000638901
I
0.788
T265_03056
Opisthorchis viverrini
T265_03056
I
0.798
TRE_0000705801
Trichobilharzia regenti
TRE_0000705801
I
0.798