CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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D917_06477
(
Trichinella nativa
)
Runt
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00853 (Runt)
IPR013524
D917_06477
T319799_2.00
WormBase:ParaSite (2015-Oct-22)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
D917_06477
Runt
1
128
MVSCYNPGELIATGSPNLFCSELPRHWRSNKSLPMAFTVIALGEIKDGTKVSVKAGNEENFCAELRNSTAIMTNQVARFNDLRFLGKSGRGKMFTLTITVHTWPPQVTTYSKAIKITVDGPRGSRKPK
Links
Other
Runt
family TFs
Other
Trichinella nativa
TFs
8 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
A1O5_07945
Cladophialophora psammophila
A1O5_07945
N
0.000
A1O7_05540
Cladophialophora yegresii
A1O7_05540
N
0.000
A1O9_03728
Exophiala aquamarina
A1O9_03728
N
0.000
AB01725.1
Alternaria brassicicola
AB01725.1
N
0.000
BBA_01486
Beauveria bassiana
BBA_01486
N
0.000
AFUA_2G10850
Aspergillus fumigatus
CADAFUAG00004240
N
0.000
ANIA_05924
Aspergillus nidulans
CADANIAG00007107
N
0.000
CCM_05346
Cordyceps militaris
CCM_05346
N
0.000
COCC4DRAFT_151267
Bipolaris maydis
COCC4DRAFT_151267
N
0.000
COCCADRAFT_88870
Bipolaris zeicola
COCCADRAFT_88870
N
0.000
COCMIDRAFT_99367
Bipolaris oryzae
COCMIDRAFT_99367
N
0.000
COCSADRAFT_312964
Bipolaris sorokiniana
COCSADRAFT_312964
N
0.000
COCVIDRAFT_40098
Bipolaris victoriae
COCVIDRAFT_40098
N
0.000
FFUJ_05016
Fusarium fujikuroi
FFUJ_05016
N
0.000
FPSE_11291
Fusarium pseudograminearum
FPSE_11291
N
0.000
G647_09706
Cladophialophora carrionii
G647_09706
N
0.000
GMDG_04003
Pseudogymnoascus destructans
GMDG_04003
N
0.000
GSTUM_00000679001
Tuber melanosporum
GSTUM_00000679001
N
0.000
HMPREF1120_01168
Exophiala dermatitidis
HMPREF1120_01168
N
0.000
HMPREF1541_01199
Cyphellophora europaea
HMPREF1541_01199
N
0.000
M437DRAFT_45546
Aureobasidium melanogenum
M437DRAFT_45546
I
0.000
M438DRAFT_281522
Aureobasidium pullulans
M438DRAFT_281522
I
0.000
Pc22g21140
Penicillium chrysogenum
Pc22g21140
N
0.000
PCH_Pc22g21140
Penicillium rubens
PCH_Pc22g21140
N
0.000
PDIP_63820
Penicillium digitatum
PDIP_63820
N
0.000
PITC_004270
Penicillium italicum
PITC_004270
N
0.000
PV04_05906
Capronia semiimmersa
PV04_05906
N
0.000
PV05_04590
Exophiala xenobiotica
PV05_04590
N
0.000
PV06_01163
Exophiala oligosperma
PV06_01163
N
0.000
PV07_04349
Cladophialophora immunda
PV07_04349
N
0.000
PV10_06983
Exophiala mesophila
PV10_06983
N
0.000
SETTUDRAFT_155086
Setosphaeria turcica
SETTUDRAFT_155086
N
0.000
U727_00431202221
Penicillium solitum
U727_00431202221
N
0.000
Z517_04112
Fonsecaea pedrosoi
Z517_04112
N
0.000
Z519_07787
Cladophialophora bantiana
Z519_07787
N
0.000