CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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D917_06477
(
Trichinella nativa
)
Runt
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00853 (Runt)
IPR013524
D917_06477
T319799_2.00
WormBase:ParaSite (2015-Oct-22)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
D917_06477
Runt
1
128
MVSCYNPGELIATGSPNLFCSELPRHWRSNKSLPMAFTVIALGEIKDGTKVSVKAGNEENFCAELRNSTAIMTNQVARFNDLRFLGKSGRGKMFTLTITVHTWPPQVTTYSKAIKITVDGPRGSRKPK
Links
Other
Runt
family TFs
Other
Trichinella nativa
TFs
8 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
EFV53501
Trichinella spiralis
EFV53501
N
1.000
D918_01888
Trichuris suis
D918_01888
N
0.930
TMUE_s0043002600
Trichuris muris
TMUE_s0043002600
N
0.906
SBAD_0000678401
Soboliphyme baturini
SBAD_0000678401
N
0.753
ENSAPLG00000007026
Anas platyrhynchos
ENSAPLG00000007026
I
0.711
Aan_R007315
Calypte anna
Aan_R007315
I
0.711
Afo_R004888
Aptenodytes forsteri
Afo_R004888
I
0.711
Brh_R001637
Buceros rhinoceros
Brh_R001637
I
0.711