OB01G18870 (Oryza brachyantha)
RWP-RK

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF02042 (RWP-RK) IPR003035 OB01G18870 T320550_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
NLP7
M07251_2.00 		Arabidopsis thaliana
WNDTGNCYYTTSRDD
HHYSAARRGNCAHNW		 Dap-seq
OMalley et al.(2016)
NLP7_col_a 		0.939 0.939
NLP4
M07248_2.00 		Arabidopsis thaliana
NNHNNBTGCTGYHNN
NNDRCAGCAVNNDNN		 Dap-seq
OMalley et al.(2016)
AtNLP4_col_b 		0.816 0.816
For this family, TFs with SR scores > 0.700 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
OB01G18870.1 RWP-RK 407 455

Links

Other RWP-RK family TFs
Other Oryza brachyantha TFs

418 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
AMTR_s00089p00043950 Amborella trichopoda AMTR_s00089p00043950 N 0.000
BGIOSGA012015 Oryza indica BGIOSGA012015 N 0.000
evm.TU.supercontig_55.64 Carica papaya evm.TU.supercontig_55.64 N 0.000
gene16221-v1.0-hybrid Fragaria vesca gene16221-v1.0-hybrid N 0.000
GSMUA_Achr10G30300_001 Musa acuminata GSMUA_Achr10G30300_001 N 0.000
GSMUA_Achr11G02740_001 Musa acuminata GSMUA_Achr11G02740_001 N 0.000
GSMUA_Achr3G06660_001 Musa acuminata GSMUA_Achr3G06660_001 N 0.000
GSMUA_Achr6G10290_001 Musa acuminata GSMUA_Achr6G10290_001 N 0.000
GSMUA_Achr7G12790_001 Musa acuminata GSMUA_Achr7G12790_001 N 0.000
GSMUA_Achr8G12330_001 Musa acuminata GSMUA_Achr8G12330_001 N 0.000
LPERR03G05820 Leersia perrieri LPERR03G05820 N 0.000
Lus10001271.g Linum usitatissimum Lus10001271.g N 0.000
Lus10009475.g Linum usitatissimum Lus10009475.g N 0.000
MLOC_67417 Hordeum vulgare MLOC_67417 N 0.000
OBART03G06470 Oryza barthii OBART03G06470 N 0.000
OGLUM03G06480 Oryza glumaepatula OGLUM03G06480 N 0.000
OLONG_001045 Oryza longistaminata OLONG_001045 N 0.000
OMERI03G06350 Oryza meridionalis OMERI03G06350 N 0.000
ONIVA02G06380 Oryza nivara ONIVA02G06380 N 0.000
ORGLA03G0062600 Oryza glaberrima ORGLA03G0062600 N 0.000
ORUFI03G06370 Oryza rufipogon ORUFI03G06370 N 0.000
OS03G0188400 Oryza sativa OS03G0188400 N 0.000
POPTR_0002s18100 Populus trichocarpa POPTR_0002s18100 N 0.000
POPTR_0014s10190 Populus trichocarpa POPTR_0014s10190 N 0.000
SapurV1A.0003s0430 Salix purpurea SapurV1A.0003s0430 N 0.000
SapurV1A.0151s0200 Salix purpurea SapurV1A.0151s0200 N 0.000
SapurV1A.0162s0340 Salix purpurea SapurV1A.0162s0340 N 0.000
Si013925m.g Setaria italica Si013925m.g N 0.000
TRIUR3_09788 Triticum urartu TRIUR3_09788 N 0.000
VIT_07s0191g00240 Vitis vinifera VIT_07s0191g00240 N 0.000