Lus10001271.g (Linum usitatissimum)
bHLH

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00010 (HLH) IPR001092 Lus10001271.g T050131_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
Lus10001271 bHLH 90 141

Links

Other bHLH family TFs
Other Linum usitatissimum TFs

238 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
Lus10009475.g Linum usitatissimum Lus10009475.g N 0.914
SapurV1A.0151s0200 Salix purpurea SapurV1A.0151s0200 N 0.884
GSMUA_Achr3G06660_001 Musa acuminata GSMUA_Achr3G06660_001 N 0.881
BHLH96 Arabidopsis thaliana AT1G72210 N 0.876
BGIOSGA030936 Oryza indica BGIOSGA030936 N 0.876
Bo6g092570 Brassica oleracea Bo6g092570 N 0.876
Bra003886 Brassica rapa Bra003886 N 0.876
Bra016080 Brassica rapa Bra016080 N 0.876
GLYMA02G37313 Glycine max GLYMA02G37313 N 0.876
GLYMA14G35560 Glycine max GLYMA14G35560 N 0.876
GRMZM2G082586 Zea mays GRMZM2G082586 N 0.876
GSMUA_Achr8G17650_001 Musa acuminata GSMUA_Achr8G17650_001 N 0.876
MLOC_21759 Hordeum vulgare MLOC_21759 N 0.876
OB09G19960 Oryza brachyantha OB09G19960 N 0.876
OMERI09G10430 Oryza meridionalis OMERI09G10430 N 0.876
ONIVA09G13890 Oryza nivara ONIVA09G13890 N 0.876
OPUNC09G11790 Oryza punctata OPUNC09G11790 N 0.876
ORGLA09G0101900 Oryza glaberrima ORGLA09G0101900 N 0.876
ORUFI09G14410 Oryza rufipogon ORUFI09G14410 N 0.876
OS09G0468700 Oryza sativa OS09G0468700 N 0.876
POPTR_0002s10230 Populus trichocarpa POPTR_0002s10230 N 0.876
Sb02g027210 Sorghum bicolor Sb02g027210 N 0.876
TCM_034439 Theobroma cacao TCM_034439 N 0.876
Traes_5BL_DA72CE20D Triticum aestivum Traes_5BL_DA72CE20D N 0.876
VIT_18s0001g06650 Vitis vinifera VIT_18s0001g06650 N 0.876
29908.m006098 Ricinus communis 29908.m006098 N 0.876
cassava31098.valid.m1 Manihot esculenta cassava31098.valid.m1 N 0.876
cassava35271.valid.m1 Manihot esculenta cassava35271.valid.m1 N 0.876
Bostr.10273s0131 Boechera stricta Bostr.10273s0131 N 0.876
Cagra.4006s0007 Capsella grandiflora Cagra.4006s0007 N 0.876
Carubv10020657m.g Capsella rubella Carubv10020657m.g N 0.876
Ciclev10001811m.g Citrus clementina Ciclev10001811m.g N 0.876
Eucgr.B00048 Eucalyptus grandis Eucgr.B00048 N 0.876
evm.TU.supercontig_36.191 Carica papaya evm.TU.supercontig_36.191 N 0.876
orange1.1g020210m.g Citrus sinensis orange1.1g020210m.g N 0.876
Pavir.Bb02386 Panicum virgatum Pavir.Bb02386 N 0.876
Pavir.J22933 Panicum virgatum Pavir.J22933 N 0.876
SapurV1A.0613s0120 Salix purpurea SapurV1A.0613s0120 N 0.876
Thhalv10018867m.g Eutrema salsugineum Thhalv10018867m.g N 0.876
chr1.LjT16B05.110.nd Lotus japonicus chr1.LjT16B05.110.nd N 0.876
POPTR_0002s18100 Populus trichocarpa POPTR_0002s18100 N 0.870
SapurV1A.0003s0430 Salix purpurea SapurV1A.0003s0430 N 0.870
scaffold_105519.1 Arabidopsis lyrata scaffold_105519.1 N 0.868
Ca_28086 Cicer arietinum Ca_28086 N 0.864
POPTR_0001s02350 Populus trichocarpa POPTR_0001s02350 N 0.861
gene16221-v1.0-hybrid Fragaria vesca gene16221-v1.0-hybrid N 0.861
POPTR_0014s10190 Populus trichocarpa POPTR_0014s10190 N 0.857
SapurV1A.0162s0340 Salix purpurea SapurV1A.0162s0340 N 0.857
Bo2g075510 Brassica oleracea Bo2g075510 N 0.856
Bra008017 Brassica rapa Bra008017 N 0.856
LPERR09G09700 Leersia perrieri LPERR09G09700 N 0.856
cassava34492.m1 Manihot esculenta cassava34492.m1 N 0.856
Ciclev10026131m.g Citrus clementina Ciclev10026131m.g N 0.856
Eucgr.H04738 Eucalyptus grandis Eucgr.H04738 N 0.856
Gorai.005G094800 Gossypium raimondii Gorai.005G094800 N 0.856
Gorai.013G204300 Gossypium raimondii Gorai.013G204300 N 0.856
Lus10015902.g Linum usitatissimum Lus10015902.g N 0.856
orange1.1g043618m.g Citrus sinensis orange1.1g043618m.g N 0.856
fgenesh1_pm.C_scaffold_6002861 Arabidopsis lyrata fgenesh1_pm.C_scaffold_6002861 N 0.855
Lus10010101.g Linum usitatissimum Lus10010101.g N 0.855
Lus10012603.g Linum usitatissimum Lus10012603.g N 0.855
Pavir.Db01842 Panicum virgatum Pavir.Db01842 N 0.855
AC233899.1_FG002 Zea mays AC233899.1_FG002 N 0.852
BGIOSGA005582 Oryza indica BGIOSGA005582 N 0.852
BGIOSGA032814 Oryza indica BGIOSGA032814 N 0.852
Bo6g114730 Brassica oleracea Bo6g114730 N 0.852
GRMZM2G045883 Zea mays GRMZM2G045883 N 0.852
MTR_5g064950 Medicago truncatula MTR_5g064950 N 0.852
OB02G40170 Oryza brachyantha OB02G40170 N 0.852
OB03G16590 Oryza brachyantha OB03G16590 N 0.852
OB10G16200 Oryza brachyantha OB10G16200 N 0.852
OBART02G33270 Oryza barthii OBART02G33270 N 0.852
OBART10G08120 Oryza barthii OBART10G08120 N 0.852
OGLUM02G33770 Oryza glumaepatula OGLUM02G33770 N 0.852
OGLUM10G07850 Oryza glumaepatula OGLUM10G07850 N 0.852
OMERI02G31750 Oryza meridionalis OMERI02G31750 N 0.852
ONIVA02G35790 Oryza nivara ONIVA02G35790 N 0.852
ONIVA10G07810 Oryza nivara ONIVA10G07810 N 0.852
OPUNC02G30580 Oryza punctata OPUNC02G30580 N 0.852
OPUNC03G06240 Oryza punctata OPUNC03G06240 N 0.852
OPUNC10G07050 Oryza punctata OPUNC10G07050 N 0.852
ORGLA02G0287300 Oryza glaberrima ORGLA02G0287300 N 0.852
ORGLA10G0067600 Oryza glaberrima ORGLA10G0067600 N 0.852
ORUFI02G34810 Oryza rufipogon ORUFI02G34810 N 0.852
ORUFI10G08570 Oryza rufipogon ORUFI10G08570 N 0.852
OS10G0376900 Oryza sativa OS10G0376900 N 0.852
POPTR_0003s09200 Populus trichocarpa POPTR_0003s09200 N 0.852
Sb0012s004780 Sorghum bicolor Sb0012s004780 N 0.852
Sb01g044640 Sorghum bicolor Sb01g044640 N 0.852
Sb04g027280 Sorghum bicolor Sb04g027280 N 0.852
Si017701m.g Setaria italica Si017701m.g N 0.852
Si036568m.g Setaria italica Si036568m.g N 0.852
Si038653m.g Setaria italica Si038653m.g N 0.852
Pavir.Aa00538 Panicum virgatum Pavir.Aa00538 N 0.852
Pavir.Ia02758 Panicum virgatum Pavir.Ia02758 N 0.852
Pavir.Ia03109 Panicum virgatum Pavir.Ia03109 N 0.852
Pavir.Ia04907 Panicum virgatum Pavir.Ia04907 N 0.852
Pavir.Ib02778 Panicum virgatum Pavir.Ib02778 N 0.852
Pavir.J40759 Panicum virgatum Pavir.J40759 N 0.852
GRMZM2G015666 Zea mays GRMZM2G015666 N 0.851
AMTR_s00089p00043950 Amborella trichopoda AMTR_s00089p00043950 N 0.849
FAMA Arabidopsis thaliana AT3G24140 N 0.849
Bo1g101110 Brassica oleracea Bo1g101110 N 0.849
Bo3g082010 Brassica oleracea Bo3g082010 N 0.849
Bo7g037540 Brassica oleracea Bo7g037540 N 0.849
Bra001929 Brassica rapa Bra001929 N 0.849
Bra028357 Brassica rapa Bra028357 N 0.849
GLYMA01G23230 Glycine max GLYMA01G23230 N 0.849
GLYMA02G14290 Glycine max GLYMA02G14290 N 0.849
GLYMA06G35330 Glycine max GLYMA06G35330 N 0.849
GLYMA08G36590 Glycine max GLYMA08G36590 N 0.849
GRMZM2G008691 Zea mays GRMZM2G008691 N 0.849
MTR_0194s0050 Medicago truncatula MTR_0194s0050 N 0.849
MTR_8g066770 Medicago truncatula MTR_8g066770 N 0.849
PGSC0003DMG400015760 Solanum tuberosum PGSC0003DMG400015760 N 0.849
PGSC0003DMG400017540 Solanum tuberosum PGSC0003DMG400017540 N 0.849
PGSC0003DMG400029634 Solanum tuberosum PGSC0003DMG400029634 N 0.849
POPTR_0001s32160 Populus trichocarpa POPTR_0001s32160 N 0.849
POPTR_0017s08160 Populus trichocarpa POPTR_0017s08160 N 0.849
PRUPE_ppa017746mg Prunus persica PRUPE_ppa017746mg N 0.849
PRUPE_ppa020429mg Prunus persica PRUPE_ppa020429mg N 0.849
FMA Arabidopsis lyrata scaffold_302925.1 N 0.849
SELMODRAFT_428659 Selaginella moellendorffii SELMODRAFT_428659 N 0.849
SELMODRAFT_430716 Selaginella moellendorffii SELMODRAFT_430716 N 0.849
Solyc05g053660.1 Solanum lycopersicum Solyc05g053660.1 N 0.849
Solyc08g076820.2 Solanum lycopersicum Solyc08g076820.2 N 0.849
Solyc09g091760.1 Solanum lycopersicum Solyc09g091760.1 N 0.849
TCM_015694 Theobroma cacao TCM_015694 N 0.849
TCM_020336 Theobroma cacao TCM_020336 N 0.849
FMA Vitis vinifera VIT_05s0029g00050 N 0.849
Ca_12363 Cicer arietinum Ca_12363 N 0.849
Ca_16010 Cicer arietinum Ca_16010 N 0.849
Cla021744 Citrullus lanatus Cla021744 N 0.849
Pm009474 Prunus mume Pm009474 N 0.849
Pm023207 Prunus mume Pm023207 N 0.849
29904.m002956 Ricinus communis 29904.m002956 N 0.849
30054.m000819 Ricinus communis 30054.m000819 N 0.849
cassava27750.m1 Manihot esculenta cassava27750.m1 N 0.849
cassava27856.m1 Manihot esculenta cassava27856.m1 N 0.849
Cucsa.256420 Cucumis sativus Cucsa.256420 N 0.849
mgf015694m Mimulus guttatus mgf015694m N 0.849
Aquca_034_00130 Aquilegia coerulea Aquca_034_00130 N 0.849
Bostr.19424s0222 Boechera stricta Bostr.19424s0222 N 0.849
Cagra.0026s0026 Capsella grandiflora Cagra.0026s0026 N 0.849
Carubv10013821m.g Capsella rubella Carubv10013821m.g N 0.849
Ciclev10005031m.g Citrus clementina Ciclev10005031m.g N 0.849
Eucgr.E00273 Eucalyptus grandis Eucgr.E00273 N 0.849
evm.TU.supercontig_59.132 Carica papaya evm.TU.supercontig_59.132 N 0.849
gene02199-v1.0-hybrid Fragaria vesca gene02199-v1.0-hybrid N 0.849
Gorai.006G217200 Gossypium raimondii Gorai.006G217200 N 0.849
Gorai.008G225800 Gossypium raimondii Gorai.008G225800 N 0.849
Gorai.011G159100 Gossypium raimondii Gorai.011G159100 N 0.849
Lus10016680.g Linum usitatissimum Lus10016680.g N 0.849
MDP0000646823 Malus domestica MDP0000646823 N 0.849
orange1.1g014477m.g Citrus sinensis orange1.1g014477m.g N 0.849
SapurV1A.0462s0070 Salix purpurea SapurV1A.0462s0070 N 0.849
Thhalv10002558m.g Eutrema salsugineum Thhalv10002558m.g N 0.849
PK04856.1 Cannabis sativa PK04856.1 N 0.849
PK28391.1 Cannabis sativa PK28391.1 N 0.849
AT1G22490 Arabidopsis thaliana AT1G22490 N 0.846
Bo5g038570 Brassica oleracea Bo5g038570 N 0.846
Bo7g057920 Brassica oleracea Bo7g057920 N 0.846
Bo8g071490 Brassica oleracea Bo8g071490 N 0.846
Bra012329 Brassica rapa Bra012329 N 0.846
Bra016377 Brassica rapa Bra016377 N 0.846
Bra040856 Brassica rapa Bra040856 N 0.846
fgenesh1_pg.C_scaffold_1002057 Arabidopsis lyrata fgenesh1_pg.C_scaffold_1002057 N 0.846
GLYMA03G39990 Glycine max GLYMA03G39990 N 0.846
GLYMA04G10630 Glycine max GLYMA04G10630 N 0.846
GLYMA06G10470 Glycine max GLYMA06G10470 N 0.846
GLYMA19G42520 Glycine max GLYMA19G42520 N 0.846
GLYMA20G37550 Glycine max GLYMA20G37550 N 0.846
GSMUA_Achr10G30300_001 Musa acuminata GSMUA_Achr10G30300_001 N 0.846
MTR_3g099620 Medicago truncatula MTR_3g099620 N 0.846
MTR_7g113830 Medicago truncatula MTR_7g113830 N 0.846
PGSC0003DMG400028578 Solanum tuberosum PGSC0003DMG400028578 N 0.846
POPTR_0005s04160 Populus trichocarpa POPTR_0005s04160 N 0.846
POPTR_0013s02680 Populus trichocarpa POPTR_0013s02680 N 0.846
PRUPE_ppa009461mg Prunus persica PRUPE_ppa009461mg N 0.846
PRUPE_ppa011095mg Prunus persica PRUPE_ppa011095mg N 0.846
Si013925m.g Setaria italica Si013925m.g N 0.846
TCM_026599 Theobroma cacao TCM_026599 N 0.846
TRIUR3_09788 Triticum urartu TRIUR3_09788 N 0.846
VIT_14s0128g00110 Vitis vinifera VIT_14s0128g00110 N 0.846
Ca_01181 Cicer arietinum Ca_01181 N 0.846
Cla005338 Citrullus lanatus Cla005338 N 0.846
Cla020173 Citrullus lanatus Cla020173 N 0.846
Cla022458 Citrullus lanatus Cla022458 N 0.846
Pm003380 Prunus mume Pm003380 N 0.846
Pm004489 Prunus mume Pm004489 N 0.846
30128.m008737 Ricinus communis 30128.m008737 N 0.846
cassava13431.valid.m1 Manihot esculenta cassava13431.valid.m1 N 0.846
cassava19507.valid.m1 Manihot esculenta cassava19507.valid.m1 N 0.846
cassava22781.valid.m1 Manihot esculenta cassava22781.valid.m1 N 0.846
Cucsa.091670 Cucumis sativus Cucsa.091670 N 0.846
Cucsa.160250 Cucumis sativus Cucsa.160250 N 0.846
Cucsa.163550 Cucumis sativus Cucsa.163550 N 0.846
Aquca_005_00478 Aquilegia coerulea Aquca_005_00478 N 0.846
Bostr.12659s0103 Boechera stricta Bostr.12659s0103 N 0.846
Cagra.0114s0053 Capsella grandiflora Cagra.0114s0053 N 0.846
Carubv10011476m.g Capsella rubella Carubv10011476m.g N 0.846
Eucgr.H04468 Eucalyptus grandis Eucgr.H04468 N 0.846
evm.TU.supercontig_48.15 Carica papaya evm.TU.supercontig_48.15 N 0.846
gene12030-v1.0-hybrid Fragaria vesca gene12030-v1.0-hybrid N 0.846
gene22289-v1.0-hybrid Fragaria vesca gene22289-v1.0-hybrid N 0.846
Lus10000332.g Linum usitatissimum Lus10000332.g N 0.846
Lus10029950.g Linum usitatissimum Lus10029950.g N 0.846
MDP0000267178 Malus domestica MDP0000267178 N 0.846
MDP0000672131 Malus domestica MDP0000672131 N 0.846
MDP0000944210 Malus domestica MDP0000944210 N 0.846
orange1.1g036531m.g Citrus sinensis orange1.1g036531m.g N 0.846
SapurV1A.0092s0130 Salix purpurea SapurV1A.0092s0130 N 0.846
SapurV1A.1055s0160 Salix purpurea SapurV1A.1055s0160 N 0.846
SapurV1A.1124s0170 Salix purpurea SapurV1A.1124s0170 N 0.846
Thhalv10009836m.g Eutrema salsugineum Thhalv10009836m.g N 0.846
PK14736.1 Cannabis sativa PK14736.1 N 0.846
PK21294.1 Cannabis sativa PK21294.1 N 0.846
chr1.LjT40H13.220.nd Lotus japonicus chr1.LjT40H13.220.nd N 0.846
chr5.CM0211.190.nc Lotus japonicus chr5.CM0211.190.nc N 0.846
chr6.CM0738.340.nd Lotus japonicus chr6.CM0738.340.nd N 0.846
GSMUA_Achr7G12790_001 Musa acuminata GSMUA_Achr7G12790_001 N 0.845
chr1.CM0544.580.nd Lotus japonicus chr1.CM0544.580.nd N 0.845
GSMUA_Achr9G15000_001 Musa acuminata GSMUA_Achr9G15000_001 N 0.844
LPERR08G15350 Leersia perrieri LPERR08G15350 N 0.844
Pavir.Fb01787 Panicum virgatum Pavir.Fb01787 N 0.844
GSMUA_Achr11G21440_001 Musa acuminata GSMUA_Achr11G21440_001 N 0.842
BHLH67 Arabidopsis thaliana AT3G61950 N 0.841
Bo8g097470 Brassica oleracea Bo8g097470 N 0.841
Bra007644 Brassica rapa Bra007644 N 0.841
fgenesh2_kg.5__2692__AT3G61950.1 Arabidopsis lyrata fgenesh2_kg.5__2692__AT3G61950.1 N 0.841
Bostr.13158s0200 Boechera stricta Bostr.13158s0200 N 0.841
Cagra.0483s0048 Capsella grandiflora Cagra.0483s0048 N 0.841
Carubv10018614m.g Capsella rubella Carubv10018614m.g N 0.841
Thhalv10006045m.g Eutrema salsugineum Thhalv10006045m.g N 0.841
GSMUA_Achr11G02740_001 Musa acuminata GSMUA_Achr11G02740_001 N 0.840
GSMUA_Achr8G12330_001 Musa acuminata GSMUA_Achr8G12330_001 N 0.840
PGSC0003DMG400002125 Solanum tuberosum PGSC0003DMG400002125 N 0.838
Solyc04g074810.2 Solanum lycopersicum Solyc04g074810.2 N 0.838