29908.m006098 (Ricinus communis)
bHLH

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00010 (HLH) IPR001092 29908.m006098 T047881_2.00 JGI (2012-Mar-17)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
29908.m006098 bHLH 138 189

Links

Other bHLH family TFs
Other Ricinus communis TFs

219 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
BHLH96 Arabidopsis thaliana AT1G72210 N 0.879
BGIOSGA030936 Oryza indica BGIOSGA030936 N 0.879
Bo6g092570 Brassica oleracea Bo6g092570 N 0.879
Bra003886 Brassica rapa Bra003886 N 0.879
Bra016080 Brassica rapa Bra016080 N 0.879
GLYMA02G37313 Glycine max GLYMA02G37313 N 0.879
GLYMA14G35560 Glycine max GLYMA14G35560 N 0.879
GRMZM2G082586 Zea mays GRMZM2G082586 N 0.879
GSMUA_Achr8G17650_001 Musa acuminata GSMUA_Achr8G17650_001 N 0.879
MLOC_21759 Hordeum vulgare MLOC_21759 N 0.879
OB09G19960 Oryza brachyantha OB09G19960 N 0.879
OMERI09G10430 Oryza meridionalis OMERI09G10430 N 0.879
ONIVA09G13890 Oryza nivara ONIVA09G13890 N 0.879
OPUNC09G11790 Oryza punctata OPUNC09G11790 N 0.879
ORGLA09G0101900 Oryza glaberrima ORGLA09G0101900 N 0.879
ORUFI09G14410 Oryza rufipogon ORUFI09G14410 N 0.879
OS09G0468700 Oryza sativa OS09G0468700 N 0.879
POPTR_0002s10230 Populus trichocarpa POPTR_0002s10230 N 0.879
Sb02g027210 Sorghum bicolor Sb02g027210 N 0.879
TCM_034439 Theobroma cacao TCM_034439 N 0.879
Traes_5BL_DA72CE20D Triticum aestivum Traes_5BL_DA72CE20D N 0.879
VIT_18s0001g06650 Vitis vinifera VIT_18s0001g06650 N 0.879
cassava31098.valid.m1 Manihot esculenta cassava31098.valid.m1 N 0.879
cassava35271.valid.m1 Manihot esculenta cassava35271.valid.m1 N 0.879
Bostr.10273s0131 Boechera stricta Bostr.10273s0131 N 0.879
Cagra.4006s0007 Capsella grandiflora Cagra.4006s0007 N 0.879
Carubv10020657m.g Capsella rubella Carubv10020657m.g N 0.879
Ciclev10001811m.g Citrus clementina Ciclev10001811m.g N 0.879
Eucgr.B00048 Eucalyptus grandis Eucgr.B00048 N 0.879
orange1.1g020210m.g Citrus sinensis orange1.1g020210m.g N 0.879
Pavir.Bb02386 Panicum virgatum Pavir.Bb02386 N 0.879
Pavir.J22933 Panicum virgatum Pavir.J22933 N 0.879
SapurV1A.0613s0120 Salix purpurea SapurV1A.0613s0120 N 0.879
Thhalv10018867m.g Eutrema salsugineum Thhalv10018867m.g N 0.879
chr1.LjT16B05.110.nd Lotus japonicus chr1.LjT16B05.110.nd N 0.879
evm.TU.supercontig_36.191 Carica papaya evm.TU.supercontig_36.191 N 0.876
Lus10001271.g Linum usitatissimum Lus10001271.g N 0.876
Lus10009475.g Linum usitatissimum Lus10009475.g N 0.876
Thhalv10023998m.g Eutrema salsugineum Thhalv10023998m.g N 0.871
Ca_28086 Cicer arietinum Ca_28086 N 0.867
Bo2g075510 Brassica oleracea Bo2g075510 N 0.859
Bra008017 Brassica rapa Bra008017 N 0.859
LPERR09G09700 Leersia perrieri LPERR09G09700 N 0.859
cassava34492.m1 Manihot esculenta cassava34492.m1 N 0.859
Ciclev10026131m.g Citrus clementina Ciclev10026131m.g N 0.859
Eucgr.H04738 Eucalyptus grandis Eucgr.H04738 N 0.859
Gorai.005G094800 Gossypium raimondii Gorai.005G094800 N 0.859
Gorai.013G204300 Gossypium raimondii Gorai.013G204300 N 0.859
Lus10015902.g Linum usitatissimum Lus10015902.g N 0.859
orange1.1g043618m.g Citrus sinensis orange1.1g043618m.g N 0.859
AC233899.1_FG002 Zea mays AC233899.1_FG002 N 0.855
BGIOSGA005582 Oryza indica BGIOSGA005582 N 0.855
BGIOSGA032814 Oryza indica BGIOSGA032814 N 0.855
Bo6g114730 Brassica oleracea Bo6g114730 N 0.855
GRMZM2G045883 Zea mays GRMZM2G045883 N 0.855
MTR_5g064950 Medicago truncatula MTR_5g064950 N 0.855
OB02G40170 Oryza brachyantha OB02G40170 N 0.855
OB03G16590 Oryza brachyantha OB03G16590 N 0.855
OB10G16200 Oryza brachyantha OB10G16200 N 0.855
OBART02G33270 Oryza barthii OBART02G33270 N 0.855
OBART10G08120 Oryza barthii OBART10G08120 N 0.855
OGLUM02G33770 Oryza glumaepatula OGLUM02G33770 N 0.855
OGLUM10G07850 Oryza glumaepatula OGLUM10G07850 N 0.855
OMERI02G31750 Oryza meridionalis OMERI02G31750 N 0.855
ONIVA02G35790 Oryza nivara ONIVA02G35790 N 0.855
ONIVA10G07810 Oryza nivara ONIVA10G07810 N 0.855
OPUNC02G30580 Oryza punctata OPUNC02G30580 N 0.855
OPUNC03G06240 Oryza punctata OPUNC03G06240 N 0.855
OPUNC10G07050 Oryza punctata OPUNC10G07050 N 0.855
ORGLA02G0287300 Oryza glaberrima ORGLA02G0287300 N 0.855
ORGLA10G0067600 Oryza glaberrima ORGLA10G0067600 N 0.855
ORUFI02G34810 Oryza rufipogon ORUFI02G34810 N 0.855
ORUFI10G08570 Oryza rufipogon ORUFI10G08570 N 0.855
OS10G0376900 Oryza sativa OS10G0376900 N 0.855
Sb0012s004780 Sorghum bicolor Sb0012s004780 N 0.855
Sb01g044640 Sorghum bicolor Sb01g044640 N 0.855
Sb04g027280 Sorghum bicolor Sb04g027280 N 0.855
Si017701m.g Setaria italica Si017701m.g N 0.855
Si036568m.g Setaria italica Si036568m.g N 0.855
Si038653m.g Setaria italica Si038653m.g N 0.855
Pavir.Aa00538 Panicum virgatum Pavir.Aa00538 N 0.855
Pavir.Ia02758 Panicum virgatum Pavir.Ia02758 N 0.855
Pavir.Ia03109 Panicum virgatum Pavir.Ia03109 N 0.855
Pavir.Ia04907 Panicum virgatum Pavir.Ia04907 N 0.855
Pavir.Ib02778 Panicum virgatum Pavir.Ib02778 N 0.855
Pavir.J40759 Panicum virgatum Pavir.J40759 N 0.855
GRMZM2G008691 Zea mays GRMZM2G008691 N 0.853
fgenesh1_pm.C_scaffold_6002861 Arabidopsis lyrata fgenesh1_pm.C_scaffold_6002861 N 0.852
Lus10010101.g Linum usitatissimum Lus10010101.g N 0.852
Lus10012603.g Linum usitatissimum Lus10012603.g N 0.852
Pavir.Db01842 Panicum virgatum Pavir.Db01842 N 0.852
AT1G22490 Arabidopsis thaliana AT1G22490 N 0.849
Bo5g038570 Brassica oleracea Bo5g038570 N 0.849
Bo7g057920 Brassica oleracea Bo7g057920 N 0.849
Bo8g071490 Brassica oleracea Bo8g071490 N 0.849
Bra012329 Brassica rapa Bra012329 N 0.849
Bra016377 Brassica rapa Bra016377 N 0.849
Bra040856 Brassica rapa Bra040856 N 0.849
fgenesh1_pg.C_scaffold_1002057 Arabidopsis lyrata fgenesh1_pg.C_scaffold_1002057 N 0.849
GLYMA03G39990 Glycine max GLYMA03G39990 N 0.849
GLYMA04G10630 Glycine max GLYMA04G10630 N 0.849
GLYMA06G10470 Glycine max GLYMA06G10470 N 0.849
GLYMA19G42520 Glycine max GLYMA19G42520 N 0.849
GLYMA20G37550 Glycine max GLYMA20G37550 N 0.849
GSMUA_Achr10G30300_001 Musa acuminata GSMUA_Achr10G30300_001 N 0.849
GSMUA_Achr3G06660_001 Musa acuminata GSMUA_Achr3G06660_001 N 0.849
MTR_3g099620 Medicago truncatula MTR_3g099620 N 0.849
MTR_7g113830 Medicago truncatula MTR_7g113830 N 0.849
PGSC0003DMG400028578 Solanum tuberosum PGSC0003DMG400028578 N 0.849
POPTR_0005s04160 Populus trichocarpa POPTR_0005s04160 N 0.849
POPTR_0013s02680 Populus trichocarpa POPTR_0013s02680 N 0.849
PRUPE_ppa009461mg Prunus persica PRUPE_ppa009461mg N 0.849
PRUPE_ppa011095mg Prunus persica PRUPE_ppa011095mg N 0.849
Si013925m.g Setaria italica Si013925m.g N 0.849
TCM_026599 Theobroma cacao TCM_026599 N 0.849
TRIUR3_09788 Triticum urartu TRIUR3_09788 N 0.849
VIT_14s0128g00110 Vitis vinifera VIT_14s0128g00110 N 0.849
Ca_01181 Cicer arietinum Ca_01181 N 0.849
Cla005338 Citrullus lanatus Cla005338 N 0.849
Cla020173 Citrullus lanatus Cla020173 N 0.849
Cla022458 Citrullus lanatus Cla022458 N 0.849
Pm003380 Prunus mume Pm003380 N 0.849
Pm004489 Prunus mume Pm004489 N 0.849
30128.m008737 Ricinus communis 30128.m008737 N 0.849
cassava13431.valid.m1 Manihot esculenta cassava13431.valid.m1 N 0.849
cassava19507.valid.m1 Manihot esculenta cassava19507.valid.m1 N 0.849
cassava22781.valid.m1 Manihot esculenta cassava22781.valid.m1 N 0.849
Cucsa.091670 Cucumis sativus Cucsa.091670 N 0.849
Cucsa.160250 Cucumis sativus Cucsa.160250 N 0.849
Cucsa.163550 Cucumis sativus Cucsa.163550 N 0.849
Aquca_005_00478 Aquilegia coerulea Aquca_005_00478 N 0.849
Bostr.12659s0103 Boechera stricta Bostr.12659s0103 N 0.849
Cagra.0114s0053 Capsella grandiflora Cagra.0114s0053 N 0.849
Carubv10011476m.g Capsella rubella Carubv10011476m.g N 0.849
Eucgr.H04468 Eucalyptus grandis Eucgr.H04468 N 0.849
evm.TU.supercontig_48.15 Carica papaya evm.TU.supercontig_48.15 N 0.849
gene12030-v1.0-hybrid Fragaria vesca gene12030-v1.0-hybrid N 0.849
gene22289-v1.0-hybrid Fragaria vesca gene22289-v1.0-hybrid N 0.849
Lus10000332.g Linum usitatissimum Lus10000332.g N 0.849
Lus10029950.g Linum usitatissimum Lus10029950.g N 0.849
MDP0000267178 Malus domestica MDP0000267178 N 0.849
MDP0000672131 Malus domestica MDP0000672131 N 0.849
MDP0000944210 Malus domestica MDP0000944210 N 0.849
orange1.1g036531m.g Citrus sinensis orange1.1g036531m.g N 0.849
SapurV1A.0092s0130 Salix purpurea SapurV1A.0092s0130 N 0.849
SapurV1A.1055s0160 Salix purpurea SapurV1A.1055s0160 N 0.849
SapurV1A.1124s0170 Salix purpurea SapurV1A.1124s0170 N 0.849
Thhalv10009836m.g Eutrema salsugineum Thhalv10009836m.g N 0.849
PK14736.1 Cannabis sativa PK14736.1 N 0.849
PK21294.1 Cannabis sativa PK21294.1 N 0.849
chr1.LjT40H13.220.nd Lotus japonicus chr1.LjT40H13.220.nd N 0.849
chr5.CM0211.190.nc Lotus japonicus chr5.CM0211.190.nc N 0.849
chr6.CM0738.340.nd Lotus japonicus chr6.CM0738.340.nd N 0.849
GRMZM2G015666 Zea mays GRMZM2G015666 N 0.848
GSMUA_Achr7G12790_001 Musa acuminata GSMUA_Achr7G12790_001 N 0.848
chr1.CM0544.580.nd Lotus japonicus chr1.CM0544.580.nd N 0.848
LPERR08G15350 Leersia perrieri LPERR08G15350 N 0.847
Pavir.Fb01787 Panicum virgatum Pavir.Fb01787 N 0.847
AMTR_s00089p00043950 Amborella trichopoda AMTR_s00089p00043950 N 0.846
FAMA Arabidopsis thaliana AT3G24140 N 0.846
Bo1g101110 Brassica oleracea Bo1g101110 N 0.846
Bo3g082010 Brassica oleracea Bo3g082010 N 0.846
Bo7g037540 Brassica oleracea Bo7g037540 N 0.846
Bra001929 Brassica rapa Bra001929 N 0.846
Bra028357 Brassica rapa Bra028357 N 0.846
GLYMA01G23230 Glycine max GLYMA01G23230 N 0.846
GLYMA02G14290 Glycine max GLYMA02G14290 N 0.846
GLYMA06G35330 Glycine max GLYMA06G35330 N 0.846
GLYMA08G36590 Glycine max GLYMA08G36590 N 0.846
MTR_0194s0050 Medicago truncatula MTR_0194s0050 N 0.846
MTR_8g066770 Medicago truncatula MTR_8g066770 N 0.846
PGSC0003DMG400015760 Solanum tuberosum PGSC0003DMG400015760 N 0.846
PGSC0003DMG400017540 Solanum tuberosum PGSC0003DMG400017540 N 0.846
PGSC0003DMG400029634 Solanum tuberosum PGSC0003DMG400029634 N 0.846
POPTR_0001s32160 Populus trichocarpa POPTR_0001s32160 N 0.846
POPTR_0017s08160 Populus trichocarpa POPTR_0017s08160 N 0.846
PRUPE_ppa017746mg Prunus persica PRUPE_ppa017746mg N 0.846
PRUPE_ppa020429mg Prunus persica PRUPE_ppa020429mg N 0.846
FMA Arabidopsis lyrata scaffold_302925.1 N 0.846
SELMODRAFT_428659 Selaginella moellendorffii SELMODRAFT_428659 N 0.846
SELMODRAFT_430716 Selaginella moellendorffii SELMODRAFT_430716 N 0.846
Solyc05g053660.1 Solanum lycopersicum Solyc05g053660.1 N 0.846
Solyc08g076820.2 Solanum lycopersicum Solyc08g076820.2 N 0.846
Solyc09g091760.1 Solanum lycopersicum Solyc09g091760.1 N 0.846
TCM_015694 Theobroma cacao TCM_015694 N 0.846
TCM_020336 Theobroma cacao TCM_020336 N 0.846
FMA Vitis vinifera VIT_05s0029g00050 N 0.846
Ca_12363 Cicer arietinum Ca_12363 N 0.846
Ca_16010 Cicer arietinum Ca_16010 N 0.846
Cla021744 Citrullus lanatus Cla021744 N 0.846
Pm009474 Prunus mume Pm009474 N 0.846
Pm023207 Prunus mume Pm023207 N 0.846
29904.m002956 Ricinus communis 29904.m002956 N 0.846
30054.m000819 Ricinus communis 30054.m000819 N 0.846
cassava27750.m1 Manihot esculenta cassava27750.m1 N 0.846
cassava27856.m1 Manihot esculenta cassava27856.m1 N 0.846
Cucsa.256420 Cucumis sativus Cucsa.256420 N 0.846
mgf015694m Mimulus guttatus mgf015694m N 0.846
Aquca_034_00130 Aquilegia coerulea Aquca_034_00130 N 0.846
Bostr.19424s0222 Boechera stricta Bostr.19424s0222 N 0.846
Cagra.0026s0026 Capsella grandiflora Cagra.0026s0026 N 0.846
Carubv10013821m.g Capsella rubella Carubv10013821m.g N 0.846
Ciclev10005031m.g Citrus clementina Ciclev10005031m.g N 0.846
Eucgr.E00273 Eucalyptus grandis Eucgr.E00273 N 0.846
evm.TU.supercontig_59.132 Carica papaya evm.TU.supercontig_59.132 N 0.846
gene02199-v1.0-hybrid Fragaria vesca gene02199-v1.0-hybrid N 0.846
Gorai.006G217200 Gossypium raimondii Gorai.006G217200 N 0.846
Gorai.008G225800 Gossypium raimondii Gorai.008G225800 N 0.846
Gorai.011G159100 Gossypium raimondii Gorai.011G159100 N 0.846
Lus10016680.g Linum usitatissimum Lus10016680.g N 0.846
MDP0000646823 Malus domestica MDP0000646823 N 0.846
orange1.1g014477m.g Citrus sinensis orange1.1g014477m.g N 0.846
SapurV1A.0151s0200 Salix purpurea SapurV1A.0151s0200 N 0.846
SapurV1A.0462s0070 Salix purpurea SapurV1A.0462s0070 N 0.846
Thhalv10002558m.g Eutrema salsugineum Thhalv10002558m.g N 0.846
PK04856.1 Cannabis sativa PK04856.1 N 0.846
PK28391.1 Cannabis sativa PK28391.1 N 0.846
PGSC0003DMG400002125 Solanum tuberosum PGSC0003DMG400002125 N 0.841
Solyc04g074810.2 Solanum lycopersicum Solyc04g074810.2 N 0.841