CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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OS04G0495800
(
Oryza sativa
)
RWP-RK
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF02042 (RWP-RK)
IPR003035
OS04G0495800
T320662_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
NLP7
M07251_2.00
Arabidopsis thaliana
WNDTGNCYYTTSRDD
HHYSAARRGNCAHNW
Dap-seq
OMalley et al.(2016)
NLP7_col_a
0.857
0.857
NLP4
M07248_2.00
Arabidopsis thaliana
NNHNNBTGCTGYHNN
NNDRCAGCAVNNDNN
Dap-seq
OMalley et al.(2016)
AtNLP4_col_b
0.816
0.816
For this family, TFs with SR scores >
0.700
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
OS04T0495800-01
RWP-RK
567
615
NISLDVLRKYFSGSLKDAAKSLGVCPTTLKRICRHHGISRWPSRKINKV
OS04T0495800-02
RWP-RK
524
572
NISLDVLRKYFSGSLKDAAKSLGVCPTTLKRICRHHGISRWPSRKINKV
Links
Other
RWP-RK
family TFs
Other
Oryza sativa
TFs
421 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
ANCCAN_22589
Ancylostoma caninum
ANCCAN_22589
I
augustus_masked-nMf.1.1.scaf00383-processed-gene-0.1
Meloidogyne floridensis
augustus_masked-nMf.1.1.scaf00383-processed-gene-0.1
I
CBG19870
Caenorhabditis briggsae
CBG19870
I
CBN16259
Caenorhabditis brenneri
CBN16259
I
CJA19491
Caenorhabditis japonica
CJA19491
I
CRE28659
Caenorhabditis remanei
CRE28659
I
CRE30546
Caenorhabditis remanei
CRE30546
I
L596_g14937
Steinernema carpocapsae
L596_g14937
I
L596_g7829
Steinernema carpocapsae
L596_g7829
I
L889_g304
Steinernema feltiae
L889_g304
I
L892_g3438
Steinernema scapterisci
L892_g3438
I
L892_g3686
Steinernema scapterisci
L892_g3686
I
L893_g13425
Steinernema glaseri
L893_g13425
I
L898_g30036
Steinernema monticolum
L898_g30036
I
L898_g9613
Steinernema monticolum
L898_g9613
I
Minc11986
Meloidogyne incognita
Minc11986
I
PPA17263
Pristionchus pacificus
PPA17263
I
scaffold19-EXSNAP2012.26
Pristionchus exspectatus
scaffold19-EXSNAP2012.26
I
scaffold303-EXSNAP2012.4
Pristionchus exspectatus
scaffold303-EXSNAP2012.4
I
scaffold731-EXSNAP2012.1
Pristionchus exspectatus
scaffold731-EXSNAP2012.1
I
nhr-46
Caenorhabditis elegans
WBGene00003636
D
nhr-118
Caenorhabditis elegans
WBGene00003708
I