cassava43767.valid.m1 (Manihot esculenta)
RWP-RK

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF02042 (RWP-RK) IPR003035 cassava43767.valid.m1 T320949_2.00 JGI (2012-Mar-17)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
NLP4
M07248_2.00 		Arabidopsis thaliana
NNHNNBTGCTGYHNN
NNDRCAGCAVNNDNN		 Dap-seq
OMalley et al.(2016)
AtNLP4_col_b 		0.918 0.918
NLP7
M07251_2.00 		Arabidopsis thaliana
WNDTGNCYYTTSRDD
HHYSAARRGNCAHNW		 Dap-seq
OMalley et al.(2016)
NLP7_col_a 		0.837 0.837
For this family, TFs with SR scores > 0.700 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
cassava43767.valid.m1 RWP-RK 608 656

Links

Other RWP-RK family TFs
Other Manihot esculenta TFs

414 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
AALB007753 Anopheles albimanus AALB007753 I 0.000
AALB009220 Anopheles albimanus AALB009220 I 0.000
AARA004356 Anopheles arabiensis AARA004356 I 0.000
AARA011332 Anopheles arabiensis AARA011332 I 0.000
ACHR004078 Anopheles christyi ACHR004078 I 0.000
ACOM036889 Anopheles coluzzii ACOM036889 N 0.000
ACUA000036 Anopheles culicifacies ACUA000036 I 0.000
AEPI003479 Anopheles epiroticus AEPI003479 I 0.000
AFAF001885 Anopheles farauti AFAF001885 N 0.000
AFAF002111 Anopheles farauti AFAF002111 I 0.000
AFUN005474 Anopheles funestus AFUN005474 I 0.000
AGAP002506 Anopheles gambiae AGAP002506 I 0.000
AMEC020337 Anopheles melas AMEC020337 N 0.000
AMEM017856 Anopheles merus AMEM017856 I 0.000
AMIN002518 Anopheles minimus AMIN002518 I 0.000
AMIN005760 Anopheles minimus AMIN005760 I 0.000
AQUA008686 Anopheles quadriannulatus AQUA008686 I 0.000
AQUA009447 Anopheles quadriannulatus AQUA009447 N 0.000
ASIS002518 Anopheles sinensis ASIS002518 I 0.000
ASTEI07959 Anopheles stephensi ASTEI07959 I 0.000
CPIJ006372 Culex quinquefasciatus CPIJ006372 I 0.000
CPIJ016826 Culex quinquefasciatus CPIJ016826 I 0.000
CpipJ_CPIJ006372 Culex pipiens CpipJ_CPIJ006372 I 0.000
CpipJ_CPIJ016826 Culex pipiens CpipJ_CPIJ016826 I 0.000
runx1 Danio rerio ENSDARG00000087646 I 0.000
Runx1 Mus musculus ENSMUSG00000022952 D 0.000
GH11831 Drosophila grimshawi FBgn0119310 I 0.000
GI15484 Drosophila mojavensis FBgn0138233 I 0.000
Gfo_R015914 Geospiza fortis Gfo_R015914 I 0.000
HMEL009843 Heliconius melpomene HMEL009843 I 0.000
LCUP002648 Lucilia cuprina LCUP002648 I 0.000
LCUP002652 Lucilia cuprina LCUP002652 I 0.000
LLOJ002049 Lutzomyia longipalpis LLOJ002049 I 0.000
MESCA007079 Megaselia scalaris MESCA007079 I 0.000
RPRC000026 Rhodnius prolixus RPRC000026 I 0.000
SINV13345 Solenopsis invicta SINV13345 I 0.000