GH11831 (Drosophila grimshawi)
Runt

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00853 (Runt) IPR013524 FBgn0119310 T319538_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
lz
M03964_2.00 		Drosophila melanogaster
HRACCGCAAHM
KDTTGCGGTYD		 SELEX
Nitta et al.(2015)
lz_1 		0.806 0.806
lz
M03965_2.00 		Drosophila melanogaster
HVACCRCARWAACCRCAV
BTGYGGTTWYTGYGGTBD		 SELEX
Nitta et al.(2015)
lz_2 		0.806 0.806
lz
M03966_2.00 		Drosophila melanogaster
WRACCRCAWTAACCRCAA
TTGYGGTTAWTGYGGTYW		 SELEX
Nitta et al.(2015)
lz_3 		0.806 0.806
lz
M03967_2.00 		Drosophila melanogaster
HRACCGCAAAACCRCAR
YTGYGGTTTTGCGGTYD		 SELEX
Nitta et al.(2015)
lz_4 		0.806 0.806
For this family, TFs with SR scores > 0.700 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
FBpp0145737 Runt 96 197

Links

Other Runt family TFs
Other Drosophila grimshawi TFs

35 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
GI14398 Drosophila mojavensis FBgn0137150 I 0.878
GJ18742 Drosophila virilis FBgn0205894 I 0.878
GK25373 Drosophila willistoni FBgn0227332 I 0.847
GL16499 Drosophila persimilis FBgn0154103 I 0.827
GA22609 Drosophila pseudoobscura FBgn0244012 I 0.827
lz Drosophila melanogaster FBgn0002576 D 0.806
GG18309 Drosophila erecta FBgn0110525 I 0.806
GM22478 Drosophila sechellia FBgn0177348 I 0.806
GE17788 Drosophila yakuba FBgn0235232 I 0.806
ACEP16409 Atta cephalotes ACEP16409 I 0.755
SINV13317 Solenopsis invicta SINV13317 I 0.745
TC005796 Tribolium castaneum TC005796 I 0.745
Cflo_03909--XP_394016.2_APIME Camponotus floridanus Cflo_03909--XP_394016.2_APIME I 0.745
Hsal_12319--XP_394016.2_APIME Harpegnathos saltator Hsal_12319--XP_394016.2_APIME I 0.745
AAEL007040 Aedes aegypti AAEL007040 I 0.735
RPRC005391 Rhodnius prolixus RPRC005391 I 0.735
LCUP002648 Lucilia cuprina LCUP002648 I 0.732
CpipJ_CPIJ006372 Culex pipiens CpipJ_CPIJ006372 I 0.724
CPIJ006372 Culex quinquefasciatus CPIJ006372 I 0.724
GD16951 Drosophila simulans FBgn0188530 I 0.724
PHUM333300 Pediculus humanus PHUM333300 I 0.724
AALB009220 Anopheles albimanus AALB009220 I 0.724
ACUA000036 Anopheles culicifacies ACUA000036 I 0.724
AQUA009447 Anopheles quadriannulatus AQUA009447 N 0.724
AGAP002506 Anopheles gambiae AGAP002506 I 0.714
AARA004356 Anopheles arabiensis AARA004356 I 0.714
ACHR004078 Anopheles christyi ACHR004078 I 0.714
AEPI003479 Anopheles epiroticus AEPI003479 I 0.714
AFUN005474 Anopheles funestus AFUN005474 I 0.714
AMEC020337 Anopheles melas AMEC020337 N 0.714
AMEM017856 Anopheles merus AMEM017856 I 0.714
AMIN002518 Anopheles minimus AMIN002518 I 0.714
ASTEI07959 Anopheles stephensi ASTEI07959 I 0.714
MDOA010744 Musca domestica MDOA010744 I 0.714
AATE018583 Anopheles atroparvus AATE018583 N 0.704