Lus10003199.g (Linum usitatissimum)
RWP-RK

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF02042 (RWP-RK) IPR003035 Lus10003199.g T321167_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
NLP7
M07251_2.00 		Arabidopsis thaliana
WNDTGNCYYTTSRDD
HHYSAARRGNCAHNW		 Dap-seq
OMalley et al.(2016)
NLP7_col_a 		0.878 0.878
NLP4
M07248_2.00 		Arabidopsis thaliana
NNHNNBTGCTGYHNN
NNDRCAGCAVNNDNN		 Dap-seq
OMalley et al.(2016)
AtNLP4_col_b 		0.796 0.796
For this family, TFs with SR scores > 0.700 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Lus10003199 RWP-RK 603 651

Links

Other RWP-RK family TFs
Other Linum usitatissimum TFs

418 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
Afo_R009196 Aptenodytes forsteri Afo_R009196 N 0.000
Alligator_sinensis_CCG021849.1 Alligator sinensis Alligator_sinensis_CCG021849.1 N 0.000
Brh_R005862 Buceros rhinoceros Brh_R005862 N 0.000
Cmyd_10013651 Chelonia mydas Cmyd_10013651 I 0.000
ENSAPLG00000004470 Anas platyrhynchos ENSAPLG00000004470 N 0.000
ENSMEUG00000012828 Macropus eugenii ENSMEUG00000012828 N 0.000
NFATC3 Monodelphis domestica ENSMODG00000005276 N 0.000
Ogr09794 Ophisaurus gracilis Ogr09794 I 0.000