Cmyd_10013651 (Chelonia mydas)
Rel

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00554 (RHD_DNA_bind) IPR011539 Cmyd_10013651 T317758_2.00 GigaDB (2015-Oct-22)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
Nfatc3
M09359_2.00 		Mus musculus
RDTTTTCCA
TGGAAAAHY		 Misc
Kulakovskiy et al.(2013)
NFAC3_MOUSE.H11MO.0.B 		0.714 0.714
NFATC3
M02440_2.00 		Homo sapiens
DNTTTCCRNN
NNYGGAAANH		 PBM
Weirauch et al.(2014)
pTH9192 		0.709 0.709
NFATC3
M05693_2.00 		Homo sapiens
WNTTTCCRYN
NRYGGAAANW		 SELEX
Yin et al.(2017)
NFATC3_eDBD_HT-SELEX_1 		0.709 0.709
NFATC3
M05694_2.00 		Homo sapiens
NTTTCCATGGAAAN
NTTTCCATGGAAAN		 SELEX
Yin et al.(2017)
NFATC3_eDBD_HT-SELEX_2 		0.709 0.709
NFATC3
M05695_2.00 		Homo sapiens
DYGGAAANNNNNNNTTTCCRH
DYGGAAANNNNNNNTTTCCRH		 SELEX
Yin et al.(2017)
NFATC3_eDBD_HT-SELEX_3 		0.709 0.709
NFATC3
M09343_2.00 		Homo sapiens
RDTTTTCCA
TGGAAAAHY		 Misc
Kulakovskiy et al.(2013)
NFAC3_HUMAN.H11MO.0.B 		0.709 0.709
NFATC3
M11217_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$NFAT4_Q3 		0.709 0.709
NFATC3
M11218_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$NFAT4_Q5 		0.709 0.709
NFATC3
M05696_2.00 		Homo sapiens
WNTTTCCRYN
NRYGGAAANW		 SELEX
Yin et al.(2017)
NFATC3_eDBD_Methyl-HT-SELEX_1 		0.709 0.709
NFATC3
M05697_2.00 		Homo sapiens
NTTTCCRYGGAAAN
NTTTCCRYGGAAAN		 SELEX
Yin et al.(2017)
NFATC3_eDBD_Methyl-HT-SELEX_2 		0.709 0.709
NFATC3
M05698_2.00 		Homo sapiens
RYGGAAANHNNNDNTTTCCRY
RYGGAAANHNNNDNTTTCCRY		 SELEX
Yin et al.(2017)
NFATC3_eDBD_Methyl-HT-SELEX_3 		0.709 0.709
For this family, TFs with SR scores > 0.700 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Cmyd_10013651 Rel 412 571
Cmyd_10013651 Rel 909 994

Links

Other Rel family TFs
Other Chelonia mydas TFs

43 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
ENSPSIG00000003472 Pelodiscus sinensis ENSPSIG00000003472 N 0.941
Ogr09794 Ophisaurus gracilis Ogr09794 I 0.920
ENSAPLG00000004470 Anas platyrhynchos ENSAPLG00000004470 N 0.904
Brh_R005862 Buceros rhinoceros Brh_R005862 N 0.870
Afo_R009196 Aptenodytes forsteri Afo_R009196 N 0.862
NFATC3 Monodelphis domestica ENSMODG00000005276 N 0.829
Alligator_sinensis_CCG021849.1 Alligator sinensis Alligator_sinensis_CCG021849.1 N 0.760
ENSFALG00000007757 Ficedula albicollis ENSFALG00000007757 I 0.714
NFATC3 Meleagris gallopavo ENSMGAG00000003992 I 0.714
Nfatc3 Mus musculus ENSMUSG00000031902 D 0.714
NFATC3 Oryctolagus cuniculus ENSOCUG00000010052 I 0.714
Nfatc3 Rattus norvegicus ENSRNOG00000054264 I 0.714
NFATC3 Taeniopygia guttata ENSTGUG00000007006 I 0.714
Aan_R003860 Calypte anna Aan_R003860 I 0.714
Gfo_R015940 Geospiza fortis Gfo_R015940 I 0.714
Tal_R012379 Tyto alba Tal_R012379 I 0.714
ENSMEUG00000012828 Macropus eugenii ENSMEUG00000012828 N 0.710
NFATC3 Anolis carolinensis ENSACAG00000009839 I 0.709
NFATC3 Callithrix jacchus ENSCJAG00000015726 I 0.709
NFATC3 Homo sapiens ENSG00000072736 D 0.709
NFATC3 Gallus gallus ENSGALG00000003396 I 0.709
ENSLACG00000001332 Latimeria chalumnae ENSLACG00000001332 I 0.709
ENSOARG00000003342 Ovis aries ENSOARG00000003342 I 0.709
NFATC3 Otolemur garnettii ENSOGAG00000032524 I 0.709
NFATC3 Procavia capensis ENSPCAG00000005143 I 0.709
NFATC3 Pan troglodytes ENSPTRG00000008260 I 0.709
NFATC3 Pteropus vampyrus ENSPVAG00000016625 I 0.709
ENSSTOG00000022700 Ictidomys tridecemlineatus ENSSTOG00000022700 I 0.709
Pvit_07799 Pogona vitticeps Pvit_07799 I 0.709
ENSAMEG00000008086 Ailuropoda melanoleuca ENSAMEG00000008086 I 0.704
NFATC3 Bos taurus ENSBTAG00000004368 I 0.704
NFATC3 Canis familiaris ENSCAFG00000020324 I 0.704
ENSCSAG00000004060 Chlorocebus sabaeus ENSCSAG00000004060 I 0.704
NFATC3 Equus caballus ENSECAG00000014089 I 0.704
NFATC3 Loxodonta africana ENSLAFG00000014599 I 0.704
NFATC3 Myotis lucifugus ENSMLUG00000005918 I 0.704
NFATC3 Macaca mulatta ENSMMUG00000021843 I 0.704
ENSPANG00000018698 Papio anubis ENSPANG00000018698 I 0.704
ENSPPYG00000007483 Pongo abelii ENSPPYG00000007483 I 0.704
NFATC3 Tursiops truncatus ENSTTRG00000014611 I 0.704
NFATC3 Vicugna pacos ENSVPAG00000002581 I 0.704
ENSP00000300659-D1 Bos grunniens ENSP00000300659-D1 I 0.704
ENSP00000300659 Macaca fascicularis ENSP00000300659 I 0.704