MDP0000584547 (Malus domestica)
RWP-RK

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF02042 (RWP-RK) IPR003035 MDP0000584547 T321200_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
NLP4
M07248_2.00 		Arabidopsis thaliana
NNHNNBTGCTGYHNN
NNDRCAGCAVNNDNN		 Dap-seq
OMalley et al.(2016)
AtNLP4_col_b 		0.837 0.837
NLP7
M07251_2.00 		Arabidopsis thaliana
WNDTGNCYYTTSRDD
HHYSAARRGNCAHNW		 Dap-seq
OMalley et al.(2016)
NLP7_col_a 		0.796 0.796
For this family, TFs with SR scores > 0.700 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
MDP0000584547 RWP-RK 640 688

Links

Other RWP-RK family TFs
Other Malus domestica TFs

405 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
AC198518.3_FG005 Zea mays AC198518.3_FG005 N 0.000
BGIOSGA035596 Oryza indica BGIOSGA035596 N 0.000
BRADI4G06567 Brachypodium distachyon BRADI4G06567 N 0.000
BRADI4G12615 Brachypodium distachyon BRADI4G12615 N 0.000
Ca_05643 Cicer arietinum Ca_05643 N 0.000
chr5.CM0200.490.nc Lotus japonicus chr5.CM0200.490.nc N 0.000
chr5.CM0200.500.nc Lotus japonicus chr5.CM0200.500.nc N 0.000
gene12191-v1.0-hybrid Fragaria vesca gene12191-v1.0-hybrid N 0.000
GRMZM2G165188 Zea mays GRMZM2G165188 N 0.000
MTR_1g106470 Medicago truncatula MTR_1g106470 N 0.000
OB11G25500 Oryza brachyantha OB11G25500 N 0.000
OBART11G20580 Oryza barthii OBART11G20580 N 0.000
OBART12G13380 Oryza barthii OBART12G13380 N 0.000
OGLUM11G20000 Oryza glumaepatula OGLUM11G20000 N 0.000
OGLUM12G15010 Oryza glumaepatula OGLUM12G15010 N 0.000
OLONG_021754 Oryza longistaminata OLONG_021754 N 0.000
OLONG_028675 Oryza longistaminata OLONG_028675 N 0.000
ONIVA11G20620 Oryza nivara ONIVA11G20620 N 0.000
OPUNC11G17200 Oryza punctata OPUNC11G17200 N 0.000
OPUNC12G12060 Oryza punctata OPUNC12G12060 N 0.000
ORGLA11G0169400 Oryza glaberrima ORGLA11G0169400 N 0.000
ORGLA12G0196200 Oryza glaberrima ORGLA12G0196200 N 0.000
ORUFI11G22390 Oryza rufipogon ORUFI11G22390 N 0.000
ORUFI12G14590 Oryza rufipogon ORUFI12G14590 N 0.000
OS11G0634700 Oryza sativa OS11G0634700 N 0.000
Pavir.Ca02388 Panicum virgatum Pavir.Ca02388 N 0.000
Pavir.Ca02532 Panicum virgatum Pavir.Ca02532 N 0.000
Pavir.Cb00430 Panicum virgatum Pavir.Cb00430 N 0.000
Pavir.Ha00126 Panicum virgatum Pavir.Ha00126 N 0.000
Pavir.Hb00249 Panicum virgatum Pavir.Hb00249 N 0.000
Pavir.Ia01481 Panicum virgatum Pavir.Ia01481 N 0.000
Pavir.Ib03951 Panicum virgatum Pavir.Ib03951 N 0.000
Sb01g014580 Sorghum bicolor Sb01g014580 N 0.000
Sb08g019780 Sorghum bicolor Sb08g019780 N 0.000
Si022813m.g Setaria italica Si022813m.g N 0.000
Si024550m.g Setaria italica Si024550m.g N 0.000
Si028242m.g Setaria italica Si028242m.g N 0.000
Si038695m.g Setaria italica Si038695m.g N 0.000
Solyc10g049720.1 Solanum lycopersicum Solyc10g049720.1 N 0.000
TRAES3BF169000100CFD_g Triticum aestivum TRAES3BF169000100CFD_g N 0.000
Traes_3DL_801E89185 Triticum aestivum Traes_3DL_801E89185 N 0.000
TRIUR3_10349 Triticum urartu TRIUR3_10349 N 0.000