Pavir.Cb00430 (Panicum virgatum)
bHLH

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00010 (HLH) IPR001092 Pavir.Cb00430 T050721_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
Pavir.Cb00430.1.p bHLH 225 270

Links

Other bHLH family TFs
Other Panicum virgatum TFs

58 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
AC198518.3_FG005 Zea mays AC198518.3_FG005 N 0.914
BGIOSGA035596 Oryza indica BGIOSGA035596 N 0.914
MTR_1g106470 Medicago truncatula MTR_1g106470 N 0.914
OBART11G20580 Oryza barthii OBART11G20580 N 0.914
OGLUM11G20000 Oryza glumaepatula OGLUM11G20000 N 0.914
OLONG_021754 Oryza longistaminata OLONG_021754 N 0.914
ONIVA11G20620 Oryza nivara ONIVA11G20620 N 0.914
ORGLA11G0169400 Oryza glaberrima ORGLA11G0169400 N 0.914
ORUFI11G22390 Oryza rufipogon ORUFI11G22390 N 0.914
OS11G0634700 Oryza sativa OS11G0634700 N 0.914
Sb01g014580 Sorghum bicolor Sb01g014580 N 0.914
Sb08g019780 Sorghum bicolor Sb08g019780 N 0.914
Si022813m.g Setaria italica Si022813m.g N 0.914
Si038695m.g Setaria italica Si038695m.g N 0.914
Ca_05643 Cicer arietinum Ca_05643 N 0.914
gene12191-v1.0-hybrid Fragaria vesca gene12191-v1.0-hybrid N 0.914
Pavir.Ca02532 Panicum virgatum Pavir.Ca02532 N 0.914
Pavir.Ia01481 Panicum virgatum Pavir.Ia01481 N 0.914
Pavir.Ib03951 Panicum virgatum Pavir.Ib03951 N 0.914
chr5.CM0200.490.nc Lotus japonicus chr5.CM0200.490.nc N 0.914
OB11G25500 Oryza brachyantha OB11G25500 N 0.912
OPUNC11G17200 Oryza punctata OPUNC11G17200 N 0.912
Solyc10g049720.1 Solanum lycopersicum Solyc10g049720.1 N 0.912
Pavir.Hb00249 Panicum virgatum Pavir.Hb00249 N 0.912
chr5.CM0200.500.nc Lotus japonicus chr5.CM0200.500.nc N 0.912
BRADI4G12615 Brachypodium distachyon BRADI4G12615 N 0.909
GRMZM2G165188 Zea mays GRMZM2G165188 N 0.909
Si028242m.g Setaria italica Si028242m.g N 0.909
TRAES3BF169000100CFD_g Triticum aestivum TRAES3BF169000100CFD_g N 0.909
Traes_3DL_801E89185 Triticum aestivum Traes_3DL_801E89185 N 0.909
TRIUR3_10349 Triticum urartu TRIUR3_10349 N 0.909
Pavir.Ha00126 Panicum virgatum Pavir.Ha00126 N 0.909
BGIOSGA013618 Oryza indica BGIOSGA013618 N 0.894
LPERR03G29580 Leersia perrieri LPERR03G29580 N 0.894
OGLUM03G34950 Oryza glumaepatula OGLUM03G34950 N 0.894
OLONG_003723 Oryza longistaminata OLONG_003723 N 0.894
OMERI03G32400 Oryza meridionalis OMERI03G32400 N 0.894
ONIVA03G36690 Oryza nivara ONIVA03G36690 N 0.894
OPUNC03G32220 Oryza punctata OPUNC03G32220 N 0.894
ORGLA03G0322200 Oryza glaberrima ORGLA03G0322200 N 0.894
ORGLA10G0168100 Oryza glaberrima ORGLA10G0168100 N 0.894
ORUFI03G36640 Oryza rufipogon ORUFI03G36640 N 0.894
OB03G42180 Oryza brachyantha OB03G42180 N 0.883
PRUPE_ppa015724mg Prunus persica PRUPE_ppa015724mg N 0.879
Si024550m.g Setaria italica Si024550m.g N 0.868
Pavir.Ca02388 Panicum virgatum Pavir.Ca02388 N 0.868
BRADI4G06567 Brachypodium distachyon BRADI4G06567 N 0.864
PGSC0003DMG400003231 Solanum tuberosum PGSC0003DMG400003231 N 0.859
Solyc10g049780.1 Solanum lycopersicum Solyc10g049780.1 N 0.859
Pm021173 Prunus mume Pm021173 N 0.859
BGIOSGA037460 Oryza indica BGIOSGA037460 N 0.852
OBART12G13380 Oryza barthii OBART12G13380 N 0.852
OGLUM12G15010 Oryza glumaepatula OGLUM12G15010 N 0.852
OLONG_028675 Oryza longistaminata OLONG_028675 N 0.852
ORGLA12G0196200 Oryza glaberrima ORGLA12G0196200 N 0.852
ORUFI12G14590 Oryza rufipogon ORUFI12G14590 N 0.852
F775_23312 Aegilops tauschii F775_23312 N 0.851
MDP0000876738 Malus domestica MDP0000876738 N 0.847