Cagra.0666s0032 (Capsella grandiflora)
S1FA

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF04689 (S1FA) IPR006779 Cagra.0666s0032 T321486_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
S1FA3
M07252_2.00 		Arabidopsis thaliana
RGAASNTTCTAGAAN
NTTCTAGAANSTTCY		 Dap-seq
OMalley et al.(2016)
AT3G09735_col_a 		0.742 0.742
For this family, TFs with SR scores > 0.700 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Cagra.0666s0032.1.p S1FA 11 76

Links

Other S1FA family TFs
Other Capsella grandiflora TFs

80 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
Aquca_014_00805 Aquilegia coerulea Aquca_014_00805 N 0.000
SIGD Arabidopsis thaliana AT5G13730 N 0.000
Bo2g011520 Brassica oleracea Bo2g011520 N 0.000
Bo9g166510 Brassica oleracea Bo9g166510 N 0.000
Bostr.2902s0107 Boechera stricta Bostr.2902s0107 N 0.000
Bra008807 Brassica rapa Bra008807 N 0.000
Bra023430 Brassica rapa Bra023430 N 0.000
Cagra.0596s0063 Capsella grandiflora Cagra.0596s0063 N 0.000
Carubv10001054m.g Capsella rubella Carubv10001054m.g N 0.000
Ciclev10033747m.g Citrus clementina Ciclev10033747m.g N 0.000
Cucsa.248920 Cucumis sativus Cucsa.248920 N 0.000
evm.TU.supercontig_125.39 Carica papaya evm.TU.supercontig_125.39 N 0.000
gene29494-v1.0-hybrid Fragaria vesca gene29494-v1.0-hybrid N 0.000
MDP0000235160 Malus domestica MDP0000235160 N 0.000
MDP0000266956 Malus domestica MDP0000266956 N 0.000
mgf003626m Mimulus guttatus mgf003626m N 0.000
orange1.1g046578m.g Citrus sinensis orange1.1g046578m.g N 0.000
PDK_20s1385451g001 Phoenix dactylifera PDK_20s1385451g001 N 0.000
PGSC0003DMG402006783 Solanum tuberosum PGSC0003DMG402006783 N 0.000
Pm016510 Prunus mume Pm016510 N 0.000
PRUPE_ppa017025mg Prunus persica PRUPE_ppa017025mg N 0.000
Solyc01g087690.1 Solanum lycopersicum Solyc01g087690.1 N 0.000
Thhalv10013654m.g Eutrema salsugineum Thhalv10013654m.g N 0.000
SIG4 Vitis vinifera VIT_13s0064g00190 N 0.000