CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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samd11
(
Danio rerio
)
SAND
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF01342 (SAND)
IPR000770
ENSDARG00000077852
T321665_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
Q4RVQ8_TETNG
M02466_2.00
Tetraodon nigroviridis
NNNNDCGRNN
NNYCGHNNNN
PBM
Weirauch et al.(2014)
pTH6271
0.993
0.974
For this family, TFs with SR scores >
0.843
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
ENSDARP00000112558
SAND
90
165
DNGEPCIEVECGENKALLYINKLCQGSKGPSIKYRTEWLTPNEFQFVSGRETAKDWKRSIRHKGKSLKTLMSKGIL
ENSDARP00000118743
SAND
90
163
DNGEPCIEVECGENKALLYINKLCQGSKGPSIKYRTEWLTPNEFQFVSGRETAKDWKRSIRHKGKSVAGCTRMD
Links
Other
SAND
family TFs
Other
Danio rerio
TFs
20 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
ENSAMEG00000001439
Ailuropoda melanoleuca
ENSAMEG00000001439
N
ENSCSAG00000001620
Chlorocebus sabaeus
ENSCSAG00000001620
I
ZNF671
Homo sapiens
ENSG00000083814
D
ZNF671
Gorilla gorilla
ENSGGOG00000013454
I
ZNF671
Macaca mulatta
ENSMMUG00000023357
I
ENSNLEG00000010999
Nomascus leucogenys
ENSNLEG00000010999
I
ZNF671
Otolemur garnettii
ENSOGAG00000028005
I
ENSP00000338670
Macaca fascicularis
ENSP00000338670
I
ENSPANG00000017029
Papio anubis
ENSPANG00000017029
I
ZNF671
Pan troglodytes
ENSPTRG00000011569
I
ENSTSYG00000008091
Tarsius syrichta
ENSTSYG00000008091
I