Q4RVQ8_TETNG (Tetraodon nigroviridis)
SAND

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF01342 (SAND) IPR000770 Q4RVQ8_TETNG T322072_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
Q4RVQ8_TETNG
M02466_2.00		 Tetraodon nigroviridis
NNNNDCGRNN
NNYCGHNNNN		 PBM
Weirauch et al.(2014)
pTH6271		 (Direct) (Direct)

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
For this family, TFs with SR scores > 0.843 will likely have a similar motif

Experimental Constructs

Motif ID Domain From To Sequence
M02466_2.00 SAND 1 75

DNA Binding Domains

Protein ID Domain From To Sequence
Q4RVQ8_TETNG SAND 365 439

Links

Other SAND family TFs
Other Tetraodon nigroviridis TFs

19 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
ENSLACG00000017131 Latimeria chalumnae ENSLACG00000017131 I 0.994
ENSAMXG00000012918 Astyanax mexicanus ENSAMXG00000012918 I 0.993
samd11 Danio rerio ENSDARG00000077852 I 0.993
ENSLOCG00000007210 Lepisosteus oculatus ENSLOCG00000007210 I 0.993
XP_002936428 Xenopus tropicalis XP_002936428 I 0.993
ENSMODG00000029151 Monodelphis domestica ENSMODG00000029151 I 0.990
SAMD11 Canis familiaris ENSCAFG00000019373 I 0.989
SAMD11 Dasypus novemcinctus ENSDNOG00000041400 I 0.989
ENSOARG00000008099 Ovis aries ENSOARG00000008099 I 0.989
Myotis_brandtii_SAMD11_10009655 Myotis brandtii Myotis_brandtii_SAMD11_10009655 I 0.989
fgenesh2_pg.scaffold_489000019 Branchiostoma floridae fgenesh2_pg.scaffold_489000019 I 0.989
BGLB005418 Biomphalaria glabrata BGLB005418 I 0.960
Alligator_sinensis_CCG015369.1 Alligator sinensis Alligator_sinensis_CCG015369.1 I 0.957
ISCW014501 Ixodes scapularis ISCW014501 I 0.937
SMAR002818 Strigamia maritima SMAR002818 I 0.926
SMAR002327 Strigamia maritima SMAR002327 I 0.887
SPU_022540 Strongylocentrotus purpuratus SPU_022540 I 0.885
LotgiG229327 Lottia gigantea LotgiG229327 I 0.878
HelroG194341 Helobdella robusta HelroG194341 I 0.856