LotgiG229327 (Lottia gigantea)
SAND

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF01342 (SAND) IPR000770 LotgiG229327 T322006_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
Q4RVQ8_TETNG
M02466_2.00 		Tetraodon nigroviridis
NNNNDCGRNN
NNYCGHNNNN		 PBM
Weirauch et al.(2014)
pTH6271 		0.878 0.640
For this family, TFs with SR scores > 0.843 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
LotgiP229327 SAND 77 151

Links

Other SAND family TFs
Other Lottia gigantea TFs

20 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
ISCW014501 Ixodes scapularis ISCW014501 I 0.958
SMAR002818 Strigamia maritima SMAR002818 I 0.956
BGLB005418 Biomphalaria glabrata BGLB005418 I 0.956
BGLB010875 Biomphalaria glabrata BGLB010875 N 0.911
L798_09583 Zootermopsis nevadensis L798_09583 N 0.910
ENSLOCG00000007210 Lepisosteus oculatus ENSLOCG00000007210 I 0.888
ENSAMXG00000012918 Astyanax mexicanus ENSAMXG00000012918 I 0.888
SPU_022540 Strongylocentrotus purpuratus SPU_022540 I 0.880
Q4RVQ8_TETNG Tetraodon nigroviridis Q4RVQ8_TETNG D 0.878
Myotis_brandtii_SAMD11_10009655 Myotis brandtii Myotis_brandtii_SAMD11_10009655 I 0.876
ENSLACG00000017131 Latimeria chalumnae ENSLACG00000017131 I 0.876
SAMD11 Canis familiaris ENSCAFG00000019373 I 0.876
ENSMODG00000029151 Monodelphis domestica ENSMODG00000029151 I 0.876
ENSOARG00000008099 Ovis aries ENSOARG00000008099 I 0.876
SAMD11 Dasypus novemcinctus ENSDNOG00000041400 I 0.876
XP_002936428 Xenopus tropicalis XP_002936428 I 0.876
SMAR002327 Strigamia maritima SMAR002327 I 0.872
HelroG194341 Helobdella robusta HelroG194341 I 0.872
samd11 Danio rerio ENSDARG00000077852 I 0.865
fgenesh2_pg.scaffold_489000019 Branchiostoma floridae fgenesh2_pg.scaffold_489000019 I 0.863