Alligator_sinensis_CCG015369.1 (Alligator sinensis)
SAND

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF01342 (SAND) IPR000770 Alligator_sinensis_CCG015369.1 T322123_2.00 GigaDB (2015-Oct-22)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
Q4RVQ8_TETNG
M02466_2.00 		Tetraodon nigroviridis
NNNNDCGRNN
NNYCGHNNNN		 PBM
Weirauch et al.(2014)
pTH6271 		0.957 0.855
For this family, TFs with SR scores > 0.843 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Alligator_sinensis_CCG015369.1 SAND 91 168

Links

Other SAND family TFs
Other Alligator sinensis TFs

13 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
ENSLACG00000017131 Latimeria chalumnae ENSLACG00000017131 I 0.967
samd11 Danio rerio ENSDARG00000077852 I 0.959
XP_002936428 Xenopus tropicalis XP_002936428 I 0.959
ENSAMXG00000012918 Astyanax mexicanus ENSAMXG00000012918 I 0.958
ENSLOCG00000007210 Lepisosteus oculatus ENSLOCG00000007210 I 0.958
Q4RVQ8_TETNG Tetraodon nigroviridis Q4RVQ8_TETNG D 0.957
ENSMODG00000029151 Monodelphis domestica ENSMODG00000029151 I 0.949
SAMD11 Canis familiaris ENSCAFG00000019373 I 0.938
SAMD11 Dasypus novemcinctus ENSDNOG00000041400 I 0.938
ENSOARG00000008099 Ovis aries ENSOARG00000008099 I 0.938
Myotis_brandtii_SAMD11_10009655 Myotis brandtii Myotis_brandtii_SAMD11_10009655 I 0.938
fgenesh2_pg.scaffold_489000019 Branchiostoma floridae fgenesh2_pg.scaffold_489000019 I 0.936
BGLB005418 Biomphalaria glabrata BGLB005418 I 0.870