GA21169 (Drosophila pseudoobscura)
SAND

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF01342 (SAND) IPR000770 FBgn0081157 T321962_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
Deaf1
M06445_2.00
Drosophila melanogaster
VMCGAR

YTCGKB
B1H
Zhu et al.(2011)
Deaf1_FlyReg_FBgn0013799
0.991 0.961
Deaf1
M07544_2.00
Drosophila melanogaster
VMCGAR

YTCGKB
DNaseI footprinting
Mathelier et al.(2014)
MA0185.1
0.991 0.961
Deaf1
M11268_2.00
Drosophila melanogaster Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
I$DEAF_01
0.991 0.961
Deaf1
M11269_2.00
Drosophila melanogaster Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
I$DEAF1_Q6
0.991 0.961
For this family, TFs with SR scores > 0.843 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
FBpp0275183 SAND 203 278

Links

Other SAND family TFs
Other Drosophila pseudoobscura TFs

45 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
BGIOSGA022464 Oryza indica BGIOSGA022464 N
BRADI1G45517 Brachypodium distachyon BRADI1G45517 N
F775_06135 Aegilops tauschii F775_06135 N
F775_07987 Aegilops tauschii F775_07987 N
GRMZM2G106673 Zea mays GRMZM2G106673 N
GRMZM2G173321 Zea mays GRMZM2G173321 N
LPERR06G05590 Leersia perrieri LPERR06G05590 N
Lus10014044.g Linum usitatissimum Lus10014044.g N
MLOC_76431 Hordeum vulgare MLOC_76431 N
MTR_3g101520 Medicago truncatula MTR_3g101520 N
OB06G15600 Oryza brachyantha OB06G15600 N
OLONG_013315 Oryza longistaminata OLONG_013315 N
OMERI06G07230 Oryza meridionalis OMERI06G07230 N
ONIVA06G07020 Oryza nivara ONIVA06G07020 N
ORGLA06G0055700 Oryza glaberrima ORGLA06G0055700 N
ORUFI06G06290 Oryza rufipogon ORUFI06G06290 N
OS06G0194400 Oryza sativa OS06G0194400 N
Pavir.Fb00845 Panicum virgatum Pavir.Fb00845 N
Pavir.J28012 Panicum virgatum Pavir.J28012 N
Sb07g006170 Sorghum bicolor Sb07g006170 N
Si014404m.g Setaria italica Si014404m.g N
Traes_4AL_1D254E0E4 Triticum aestivum Traes_4AL_1D254E0E4 N
Traes_7AS_A4B5D1816 Triticum aestivum Traes_7AS_A4B5D1816 N
Traes_7BS_9D1E05CB7 Triticum aestivum Traes_7BS_9D1E05CB7 N
Traes_7DS_A234A13E1 Triticum aestivum Traes_7DS_A234A13E1 N
Traes_7DS_C57224E6E Triticum aestivum Traes_7DS_C57224E6E N