CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
Home
Tools
View cart
Bulk downloads
Database stats
Contact us
Help
Update Log
FAQ
Links
How to cite
GA21169
(
Drosophila pseudoobscura
)
SAND
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF01342 (SAND)
IPR000770
FBgn0081157
T321962_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
Deaf1
M06445_2.00
Drosophila melanogaster
VMCGAR
YTCGKB
B1H
Zhu et al.(2011)
Deaf1_FlyReg_FBgn0013799
0.991
0.961
Deaf1
M07544_2.00
Drosophila melanogaster
VMCGAR
YTCGKB
DNaseI footprinting
Mathelier et al.(2014)
MA0185.1
0.991
0.961
Deaf1
M11268_2.00
Drosophila melanogaster
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
I$DEAF_01
0.991
0.961
Deaf1
M11269_2.00
Drosophila melanogaster
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
I$DEAF1_Q6
0.991
0.961
For this family, TFs with SR scores >
0.843
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
FBpp0275183
SAND
203
278
TQHMEVFQIRCKTTCAELYRSKLGSGGRGRCVKYKEKWHTPSEFENVCGRGSSKDWKRSIKYGGKSLQSLIDEGTL
Links
Other
SAND
family TFs
Other
Drosophila pseudoobscura
TFs
45 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
BGIOSGA022464
Oryza indica
BGIOSGA022464
N
BRADI1G45517
Brachypodium distachyon
BRADI1G45517
N
F775_06135
Aegilops tauschii
F775_06135
N
F775_07987
Aegilops tauschii
F775_07987
N
GRMZM2G106673
Zea mays
GRMZM2G106673
N
GRMZM2G173321
Zea mays
GRMZM2G173321
N
LPERR06G05590
Leersia perrieri
LPERR06G05590
N
Lus10014044.g
Linum usitatissimum
Lus10014044.g
N
MLOC_76431
Hordeum vulgare
MLOC_76431
N
MTR_3g101520
Medicago truncatula
MTR_3g101520
N
OB06G15600
Oryza brachyantha
OB06G15600
N
OLONG_013315
Oryza longistaminata
OLONG_013315
N
OMERI06G07230
Oryza meridionalis
OMERI06G07230
N
ONIVA06G07020
Oryza nivara
ONIVA06G07020
N
ORGLA06G0055700
Oryza glaberrima
ORGLA06G0055700
N
ORUFI06G06290
Oryza rufipogon
ORUFI06G06290
N
OS06G0194400
Oryza sativa
OS06G0194400
N
Pavir.Fb00845
Panicum virgatum
Pavir.Fb00845
N
Pavir.J28012
Panicum virgatum
Pavir.J28012
N
Sb07g006170
Sorghum bicolor
Sb07g006170
N
Si014404m.g
Setaria italica
Si014404m.g
N
Traes_4AL_1D254E0E4
Triticum aestivum
Traes_4AL_1D254E0E4
N
Traes_7AS_A4B5D1816
Triticum aestivum
Traes_7AS_A4B5D1816
N
Traes_7BS_9D1E05CB7
Triticum aestivum
Traes_7BS_9D1E05CB7
N
Traes_7DS_A234A13E1
Triticum aestivum
Traes_7DS_A234A13E1
N
Traes_7DS_C57224E6E
Triticum aestivum
Traes_7DS_C57224E6E
N