Pavir.J28012 (Panicum virgatum)
B3

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF02362 (B3) IPR003340 Pavir.J28012 T023983_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
Pavir.J28012.1.p B3 131 220

Links

Other B3 family TFs
Other Panicum virgatum TFs

22 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
Pavir.Fb00845 Panicum virgatum Pavir.Fb00845 N 0.870
BRADI1G45517 Brachypodium distachyon BRADI1G45517 N 0.867
Si014404m.g Setaria italica Si014404m.g N 0.859
GRMZM2G173321 Zea mays GRMZM2G173321 N 0.811
BGIOSGA022464 Oryza indica BGIOSGA022464 N 0.793
OLONG_013315 Oryza longistaminata OLONG_013315 N 0.793
OMERI06G07230 Oryza meridionalis OMERI06G07230 N 0.793
ONIVA06G07020 Oryza nivara ONIVA06G07020 N 0.793
ORGLA06G0055700 Oryza glaberrima ORGLA06G0055700 N 0.793
ORUFI06G06290 Oryza rufipogon ORUFI06G06290 N 0.793
OS06G0194400 Oryza sativa OS06G0194400 N 0.793
Sb07g006170 Sorghum bicolor Sb07g006170 N 0.793
GRMZM2G106673 Zea mays GRMZM2G106673 N 0.791
LPERR06G05590 Leersia perrieri LPERR06G05590 N 0.783
OB06G15600 Oryza brachyantha OB06G15600 N 0.783
OGLUM06G06330 Oryza glumaepatula OGLUM06G06330 N 0.783
F775_06135 Aegilops tauschii F775_06135 N 0.750
MLOC_76431 Hordeum vulgare MLOC_76431 N 0.750
Traes_7BS_9D1E05CB7 Triticum aestivum Traes_7BS_9D1E05CB7 N 0.750
Traes_7DS_A234A13E1 Triticum aestivum Traes_7DS_A234A13E1 N 0.750
TRIUR3_03303 Triticum urartu TRIUR3_03303 N 0.739
Sb03g026620 Sorghum bicolor Sb03g026620 N 0.728